DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1316 and Rbm45

DIOPT Version :9

Sequence 1:NP_647887.1 Gene:CG1316 / 38526 FlyBaseID:FBgn0035526 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_700454.1 Gene:Rbm45 / 241490 MGIID:2387367 Length:476 Species:Mus musculus


Alignment Length:495 Identity:178/495 - (35%)
Similarity:272/495 - (54%) Gaps:75/495 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDYRSQSRSGGGRGGQEYSNDDDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQ 65
            |.|......|||.|.|.:  :.|:||.||:|::.:|..:|...||.|||:|:|:|||||:||||:
Mouse     1 MDDAGGLGGSGGFRPGVD--SLDEPPNSRIFLVISKHTSELVLRERFSPFGDIQDIWVVRDKHTK 63

  Fly    66 ENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMD-RTLKVLVAANRNQGSNKSENEQEKYVRLFIVI 129
            |:||:|:|||:::|.|.:|.|||:|:.:|..| :.:||.:|.:|:.||:: :.|.|:..|:|::|
Mouse    64 ESKGVAFVKFARSSQACRAMEEMHGQCLGPSDTKPIKVFIAQSRSSGSHR-DVEDEELTRIFVMI 127

  Fly   130 PKTATEEDIREEFSQWGDVESVTIVKEKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEP 194
            ||:.||||:||:|..:||:|..:|:|.|..|..||.||||:.|...||.|.|||...::|:.|||
Mouse   128 PKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSFRALLAEP 192

  Fly   195 KGSTRTQRDQYGRPSEDNPLYSSSGRGNSNFNGGGSSSGG-----------GGSNSYNNDWNVSQ 248
            |....      |.|.:|:  |||          |...:.|           |...|..:.::.:.
Mouse   193 KNKVS------GSPEQDD--YSS----------GRQEALGQEPRANLFPFVGEQQSEFSTFDKND 239

  Fly   249 NNDMAAFLRMQNVPVAQPSCLEVNVSNCVNQDQLWRLFDIIPGLDYCQIMREHGPRTNEALVVYD 313
            :....|..:..:|....|          ..::||:.:|||:|||:||::.|:........:|.|.
Mouse   240 SRGQEAVSKRLSVVSRVP----------FTEEQLFSIFDIVPGLEYCEVPRDPYSNYGHGVVQYF 294

  Fly   314 NPEAAIYAKDKLHGLEYPMGERIIVK---------------VNGMSSARMDTSFIDKRTKKDAI- 362
            |..:|||||.||||.:||.|.||:|.               ...|.:|:: .|.:...|.:... 
Mouse   295 NVASAIYAKYKLHGFQYPPGNRIVVSFLDDGSNMTELIRKMATQMVAAQL-ASMVWSTTSQQQFL 358

  Fly   363 --------------CNVPLPPTQPLASPDDQVAQRLFIVLSAN-LPHSILKNIFSCWSGLIDVYL 412
                          .:|.||..:..|.|:..|.:|||:|.:.: ||..:|::||..:..||:|||
Mouse   359 QYGGNAASQAPQIQTDVVLPSCKKKAPPETPVKERLFVVFNPHPLPLDVLEDIFCRFGNLIEVYL 423

  Fly   413 LPNKNCGYVKYAEVESAQLAIRTLNGAEICGTKIKVMEAE 452
            :..||.||||||:.:||..||.||:|..:.|.::|||.|:
Mouse   424 VSGKNVGYVKYADRKSANEAITTLHGKILNGVRLKVMLAD 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1316NP_647887.1 RRM1_RBM45 25..105 CDD:240812 41/80 (51%)
RRM2_RBM45 122..195 CDD:240813 35/72 (49%)
RRM3_RBM45 267..339 CDD:240814 28/71 (39%)
RRM4_RBM45 383..449 CDD:240815 31/66 (47%)
Rbm45NP_700454.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 7/20 (35%)
RRM1_RBM45 23..104 CDD:240812 41/80 (51%)
RRM2_RBM45 120..193 CDD:240813 35/72 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..212 9/37 (24%)
RRM3_RBM45 248..320 CDD:240814 30/81 (37%)
RRM4_RBM45 393..460 CDD:240815 31/66 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835915
Domainoid 1 1.000 79 1.000 Domainoid score I8705
eggNOG 1 0.900 - - E1_2CAJT
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H15560
Inparanoid 1 1.050 284 1.000 Inparanoid score I2846
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48842
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007975
OrthoInspector 1 1.000 - - oto94783
orthoMCL 1 0.900 - - OOG6_108069
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5751
SonicParanoid 1 1.000 - - X5918
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.690

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