DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1316 and AgaP_AGAP001883

DIOPT Version :9

Sequence 1:NP_647887.1 Gene:CG1316 / 38526 FlyBaseID:FBgn0035526 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_321180.5 Gene:AgaP_AGAP001883 / 1281239 VectorBaseID:AGAP001883 Length:396 Species:Anopheles gambiae


Alignment Length:374 Identity:88/374 - (23%)
Similarity:160/374 - (42%) Gaps:84/374 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QSRSGGGRGGQEYSNDDDPPMSRLFIICN---KAHTEEDFREAFSPYGEIEDIWVVKDKHT---- 64
            |:.:||..||...|:|::   ||..:|.|   :..|||:.|..||..||:|.:.:|:||:.    
Mosquito    54 QTVAGGAAGGGGQSSDNN---SRTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPG 115

  Fly    65 ---QENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMDRTLKVLVAANRNQGSNKSENEQEKYVRLF 126
               .::.|..:|.:.:..||.:|...:||..:  .::.|||..|...::|.        |...|:
Mosquito   116 QPKGQSLGYGFVNYHRPQDAEQAVNVLNGLRL--QNKVLKVSFARPSSEGI--------KGANLY 170

  Fly   127 IV-IPKTATEEDIREEFSQWGDVESVTIVKEKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAV 190
            |. :|||.|:|::...|..:|::.:..::.:..|..|||.|::||.:...|..|.:..:.     
Mosquito   171 ISGLPKTITQEELETIFRPYGEIITSRVLIQDGNDKPKGVGFIRFDQRKEAERAIQALNG----- 230

  Fly   191 FAEPKGST---------------RTQRDQYGRPSEDNP--------LYSSSGRGNSNFNGGGSSS 232
             ..|||.|               ..:..|...|:..||        ::....:|.:.|    |..
Mosquito   231 -TTPKGLTDPITVKFSNTPGQNAAAKVVQPALPAFLNPQLTRRLGAIHHPINKGLARF----SPM 290

  Fly   233 GGGGSN-----SYNNDWNVSQNNDMAAFLRMQNVPVAQPSCLEVNVSNCVNQDQLWRLFDIIPGL 292
            ||...:     :..|..||:.:...:.|:              .|::....::.||:||.....:
Mosquito   291 GGEVLDMMLPAAPANGLNVAPSGGWSIFI--------------YNLAPETEENTLWQLFGPFGAV 341

  Fly   293 DYCQIMREHGPRTNE----ALVVYDNPEAAIYAKDKLHGLEYPMGERII 337
            ...:::::  ..||:    ..|...|.|.|:.|...|:|  |.:|:|::
Mosquito   342 QNVKVIKD--AATNQCKGYGFVTMTNYEEAMLAIRSLNG--YTLGQRVL 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1316NP_647887.1 RRM1_RBM45 25..105 CDD:240812 26/89 (29%)
RRM2_RBM45 122..195 CDD:240813 18/73 (25%)
RRM3_RBM45 267..339 CDD:240814 17/75 (23%)
RRM4_RBM45 383..449 CDD:240815
AgaP_AGAP001883XP_321180.5 ELAV_HUD_SF 71..396 CDD:273741 81/357 (23%)
RRM1_Hu 73..157 CDD:241094 25/85 (29%)
RRM2_Hu 167..245 CDD:241096 22/83 (27%)
RRM3_Hu 314..391 CDD:240823 18/91 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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