DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1316 and LOC1269457

DIOPT Version :10

Sequence 1:NP_647887.1 Gene:CG1316 / 38526 FlyBaseID:FBgn0035526 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_308097.3 Gene:LOC1269457 / 1269457 VectorBaseID:AGAMI1_010192 Length:291 Species:Anopheles gambiae


Alignment Length:321 Identity:109/321 - (33%)
Similarity:161/321 - (50%) Gaps:55/321 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKAQEE 87
            :.||.||||::|.|..|.....:.|||||.:|...:|.|:.|.::|||.:|||.|||.||:|.:|
Mosquito    18 NSPPFSRLFVLCGKQVTVGALEKFFSPYGTVEQCHIVYDQSTGQSKGIGFVKFQKTSQAARALKE 82

  Fly    88 MNGKTIGKMDRTLKVLVAANRNQGSNKSENEQEKYVRLFIVIPKTATEED---IREEFSQWGDVE 149
            .:||.|....:.:||.:|      |:..|::....:||.:   |.|.|.|   ::.||.:...|.
Mosquito    83 ADGKHIEPELKPIKVEIA------SSTIESKPLDCLRLKV---KCAAELDADAVKAEFGKISAVN 138

  Fly   150 SVTIVKEKNN-GNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEPKGSTRTQRDQYGRPSEDNP 213
            ||.:|.:|.: ||  ...|:.|..|..||:|||....::||.||:.|  .|....:..:|.|...
Mosquito   139 SVQLVPDKKSPGN--NVAYLTFESFLDAALAFETAKPEHKAKFAKIK--PRKVSLESVQPQEARS 199

  Fly   214 LYSSSGRGNSNFNGGGSSSGGGGSNSYNNDWNVSQNNDMAAFLRMQNVPVAQPSCLEVNVSNCVN 278
            .:....|..|:                                     .:..|:.|.|..|:.:.
Mosquito   200 FFRPVTRRRSS-------------------------------------TLLPPTKLTVLCSSTLT 227

  Fly   279 QDQLWRLFDIIPGLDYCQIMREHGPRTNEALVVYDNPEAAIYAKDKLHGLEYPMGERIIVK 339
            |:|:||||||||||..|.|..: |...:.|.|.|:|.::|.||::|||..|||:||||:|:
Mosquito   228 QNQIWRLFDIIPGLMNCSISHD-GGSISSATVTYNNTQSAKYAREKLHKFEYPIGERIVVR 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1316NP_647887.1 RRM1_RBM45 25..105 CDD:409801 36/79 (46%)
RRM_SF 122..195 CDD:473069 27/76 (36%)
RRM3_RBM45 267..339 CDD:409803 35/71 (49%)
RRM4_RBM45 383..449 CDD:409804
LOC1269457XP_308097.3 None
Blue background indicates that the domain is not in the aligned region.

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