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Protein Alignment srw and cv
DIOPT Version :9
Sequence 1: | NP_647886.2 |
Gene: | srw / 38525 |
FlyBaseID: | FBgn0261952 |
Length: | 136 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001284902.1 |
Gene: | cv / 44510 |
FlyBaseID: | FBgn0000394 |
Length: | 257 |
Species: | Drosophila melanogaster |
Alignment Length: | 148 |
Identity: | 71/148 - (47%) |
Similarity: | 88/148 - (59%) |
Gaps: | 36/148 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 MRKKSHTEEFEGMPALFRAMSSSPNDG--YTYNWSVVSFS---------------------TNGK 65
:.||||.|:|:|:|.||.|: ::|::| :.|||:|.:|. ||.|
Fly 86 LSKKSHVEDFDGVPELFNAV-ATPDEGDSFGYNWNVFTFQVDFDKYLKGPKLEKDGHYFLRTNDK 149
Fly 66 PGS----------GLNCTVLYLDQCTSWNKCRQTCLKTGATSYRWFHDGCCECVGELCMNYGVNE 120
... .:||||:|||||.||||||.:|..|||:|.||||||||||||..|:||||||
Fly 150 NLDEAIQERDNIVTVNCTVIYLDQCVSWNKCRTSCQTTGASSTRWFHDGCCECVGSTCINYGVNE 214
Fly 121 SRCRLCPEP--GLEDEDD 136
||||.|||. .|.||.|
Fly 215 SRCRKCPESKGELGDELD 232
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
srw | NP_647886.2 |
Tsg |
26..127 |
CDD:282516 |
64/133 (48%) |
cv | NP_001284902.1 |
Tsg |
87..221 |
CDD:398376 |
64/134 (48%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45452934 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_28J21 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S6699 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1254178at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0003932 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR12312 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
7 | 6.800 |
|
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