DRSC/TRiP Functional Genomics Resources

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Protein Alignment srw and twsg1b

DIOPT Version :9

Sequence 1:NP_647886.2 Gene:srw / 38525 FlyBaseID:FBgn0261952 Length:136 Species:Drosophila melanogaster
Sequence 2:NP_705958.1 Gene:twsg1b / 259304 ZFINID:ZDB-GENE-020812-3 Length:222 Species:Danio rerio


Alignment Length:162 Identity:44/162 - (27%)
Similarity:73/162 - (45%) Gaps:45/162 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLSFGEL--------GLANMAQMRK-----KSHTEE-FEGMPALFRAMSSSPNDGYT-------- 52
            :|..|.|        |:.|...|.:     :|..|: |:.:|:||||::......:|        
Zfish    59 MLCLGSLWEECCDCVGMCNPRSMSESPATGRSTVEDLFQPIPSLFRALTEGDAPTHTLVLTLPLA 123

  Fly    53 ----YNWSVVSF----------STNGKPGSGLN---------CTVLYLDQCTSWNKCRQTCLKTG 94
                |..::.::          :|...|.:.::         |||:|.|:|.|..:|:|.|...|
Zfish   124 EELQYQHNLHNYLETLHNTQHNNTTSVPENSIHSSYHTQDKQCTVVYFDECVSIRQCKQYCESMG 188

  Fly    95 ATSYRWFHDGCCECVGELCMNYGVNESRCRLC 126
            .:.|||||:.||:|:|..|::||....||..|
Zfish   189 GSKYRWFHNACCQCIGPECVDYGSKSVRCLNC 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
srwNP_647886.2 Tsg 26..127 CDD:282516 38/138 (28%)
twsg1bNP_705958.1 Tsg 87..221 CDD:282516 38/134 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583808
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1254178at2759
OrthoFinder 1 1.000 - - FOG0003932
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12312
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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