DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl1 and PNS1

DIOPT Version :10

Sequence 1:NP_647884.1 Gene:Ctl1 / 38523 FlyBaseID:FBgn0035523 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_014804.3 Gene:PNS1 / 854332 SGDID:S000005687 Length:539 Species:Saccharomyces cerevisiae


Alignment Length:518 Identity:95/518 - (18%)
Similarity:178/518 - (34%) Gaps:134/518 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 YYDM--------LNNWDVAQQFVGDIYSTWH----IIAMVCGLALLISIALVTMMHWL------- 229
            ||::        :.::|.|.....|....|:    .|..:|.:...|:||.:|:..|.       
Yeast    49 YYNLNSKTSGAPIGSFDEAFPTENDNKPRWNDWPFTIFFLCTVGGFIAIAAITLRAWSQTYSSTG 113

  Fly   230 ---------------SRIVSWIICVLVIVASV-ALTVALWYAYYNIRNKSGVNTQYSMLEEFVRN 278
                           :.|:...:|::.:|.|| .||:...:.                 ::|:..
Yeast   114 SGIYDGVNTGTLNTNAAILLVFVCIIALVFSVLGLTLCRIFP-----------------KQFIYC 161

  Fly   279 QQAVLTLAVLATITM----------IILIVVIYF-------LKNKLAGLSALFEEAGQCMMNLPG 326
            ...:..:|.|.|..|          |:.:|..:.       :::::....|:.:.....|...|.
Yeast   162 GMVINLVASLGTAIMYMSLRYWSAGIVFLVFTFMTAWCYWGMRSRIPLSVAVLKVVVDAMKKCPQ 226

  Fly   327 LLIAPLLAFLVLIAFLSFWVAVIICLATASSPGQSPIAPFDNSKAHQQPLPANALFVSNSTDVND 391
            :.....:..||..||...:.|||:.......|..|                      :...||: 
Yeast   227 IFFVSFVGALVASAFGFLFSAVIVATYIKYDPNSS----------------------NGGCDVS- 268

  Fly   392 LRPNARVEYAD-AGVLRSMFWI-YVVGLIWTVEFIFACQQFALAAAVAFWYFQKPTST-----PT 449
               .....::. .|||..:|:. |.:..:  :..:..|   .::.....||:...:..     |.
Yeast   269 ---GGSCSHSKLIGVLVVVFFCGYYISEV--IRNVIHC---VISGVFGSWYYMSKSDQGMPRWPA 325

  Fly   450 FYAIGKLVKYHLGTVAKGSFVITIFKIPRLILTYLYAKLKKGEDKGSECAACCLKCC---ICGF- 510
            |.|:.:.:.|..|::..||.::.:..:.|.||..:...:.  ...|.:.|...|...   |.|| 
Yeast   326 FGALKRAMTYSFGSICFGSLLVALIDLLRQILQMIRHDVT--SSGGGQIAIQILFMVFDWIIGFL 388

  Fly   511 -WLLEKFIRFLNHNAYTVVAIESINFCPAAGIAWNAMATNVLQVATINSVGDFILFLGKVVVAAL 574
             ||.|.|    ||.||:.:|:....:..||...|..:....:.....:::.:..|.|..:..:.:
Yeast   389 KWLAEYF----NHYAYSFIALYGKPYLRAAKETWYMLREKGMDALINDNLINIALGLFSMFASYM 449

  Fly   575 SGLIGIVLLK-DKPGLNFYMAPVIIIIIFSFFIAHIILSLFEMVVDTLFLCVCEDKTLNGRSG 636
            :.|...:.|: ..|..|...|....::.|||.||               |.:|...|...|||
Yeast   450 TALFTFLYLRFTSPQYNSNGAYNGALMAFSFVIA---------------LQICNIATEAIRSG 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl1NP_647884.1 Choline_transpo 287..629 CDD:461337 69/371 (19%)
PNS1NP_014804.3 Choline_transpo 187..510 CDD:461337 70/363 (19%)

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