DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl1 and AT1G25500

DIOPT Version :10

Sequence 1:NP_647884.1 Gene:Ctl1 / 38523 FlyBaseID:FBgn0035523 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_173921.1 Gene:AT1G25500 / 839136 AraportID:AT1G25500 Length:488 Species:Arabidopsis thaliana


Alignment Length:471 Identity:87/471 - (18%)
Similarity:170/471 - (36%) Gaps:121/471 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 WLSRIVSWIICVLVIVASVALTVALWYAYYNI--------RNKSGVNTQY--------------- 269
            |.:..|..:||:..::|.:.|.........||        .|..|:...|               
plant    49 WSAIFVIHLICLGFVLAVLGLNRFRISDRLNIDRYTQGFLENHKGLTEDYWPLYAVAGGIGVFIS 113

  Fly   270 ---SMLEEFVRNQQAVLTLAVLATITMII--------------------LIVVIYFLK--NKLAG 309
               |:|.....|:...:::.:|.|...::                    |:..:|.:.  ::|..
plant   114 WVWSLLLGSYANEMMKVSVHILTTYLAVVSVLCFWCRLFFWGGAFAVGSLLQFLYVISVIDRLPF 178

  Fly   310 LSALFEEAGQCMMNLPGLLIAPLLAFLVLIAFLSFW---VAVIICLATASSPGQSPIAPFDNSKA 371
            ...:..:|.:.:..||.:::......:|::.::|.|   .|.::    |||.|       |..:.
plant   179 TMLVLRKALKLVWGLPKVIMVAHAFTVVMLLWMSLWSFGAAGVV----ASSMG-------DEGRW 232

  Fly   372 HQQPLPANALFVSNSTDVNDLRPNARVEYADAGVLRSMFWIYVVGLIWTVEFIFACQQFALAAAV 436
            ....:.:.:||.:.:                  ||.:...:.|.|:::.|  :|.|.|       
plant   233 WLLVVLSVSLFWTGA------------------VLCNTVHVIVSGMVFHV--LFHCGQ------- 270

  Fly   437 AFWYFQKPTSTPTFYAIGKL---VKYHLGTVAKGSFVITIFKIPRLILTYLYAKLKKGEDKGSEC 498
                 ::.:|.|....:..|   |....|::..||......:..|..:....:|:     .|:||
plant   271 -----EESSSLPPSSLVDSLRYAVTTSFGSICYGSLFTAAIRTLRWEIRGFRSKI-----CGNEC 325

  Fly   499 AACCLKCCICGFWLLEKFIRFLNHNAYTVVAIESINFCPAAGIAWNAMATNVLQVATINSVGDFI 563
            ..||:...   |.|:|..:||.|..||..:|:....|..:|..||....:..::..........:
plant   326 LLCCVDFL---FHLVETLVRFFNKYAYVQIAVYGKGFNKSARDAWELFQSTGVEALVAYDCSGAV 387

  Fly   564 LFLGKVVVAALSG-LIGI-VLLKDKPGLNFYMAPVIIIIIFSFFIAHIILSL----FEMVVDTLF 622
            |.:|.:....::| .||| ..:|       |...||::...:..:..:::.|    .|..|.:::
plant   388 LLMGTIFGGLITGSCIGIWAWIK-------YSDRVIMVASTAMLMGMVLVGLGMVVVESAVTSIY 445

  Fly   623 LCVCEDKTLNGRSGRW 638
            :|..||..|   ..||
plant   446 ICFAEDPLL---IQRW 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl1NP_647884.1 Choline_transpo 287..629 CDD:461337 69/375 (18%)
AT1G25500NP_173921.1 Choline_transpo 157..452 CDD:461337 67/352 (19%)

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