DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl1 and AT4G38640

DIOPT Version :9

Sequence 1:NP_647884.1 Gene:Ctl1 / 38523 FlyBaseID:FBgn0035523 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_568045.1 Gene:AT4G38640 / 830020 AraportID:AT4G38640 Length:556 Species:Arabidopsis thaliana


Alignment Length:515 Identity:100/515 - (19%)
Similarity:189/515 - (36%) Gaps:155/515 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 CVPKGTGEKVQN-YYDMLNNWDVAQQFVGDIYST---------WHIIAMVCGLALLISI-----A 221
            ||...|..|:.: ||     |..:....|.:.|:         |.::     :.|::|:     .
plant   106 CVKNSTFTKISDGYY-----WASSSVMYGMVSSSDPVFEKDLIWTLV-----VTLILSVPFCFSV 160

  Fly   222 LVTMMHWLSRI----------------VSWII-CVLVIVASVALTVALWYAYYNIRNKSGVNTQY 269
            |:.:.|:..:|                |.|.: |.|....|.||.:|                 |
plant   161 LLLLKHYTKQIVYACLPLFVLFPIFFNVYWFVACTLSSSCSDALPLA-----------------Y 208

  Fly   270 SMLEEFVRNQQAVLTLAVLATITMIILIVVIYFLKN--KLAGLSALFEEAGQCM-MNLPGLLIAP 331
            .:|              ||..:.:||.|:|...:.|  ::.....:...|...: .||...::.|
plant   209 RIL--------------VLVFVFLIIGIIVWIIVANWHRIDLTIQIISVASDALSKNLKLFVVLP 259

  Fly   332 LLAFLVLIAFLSFWVAVIICLATASSPGQSPIAPFDNSKAHQQPLPANALFVSNSTDVNDLRPNA 396
            ||.    :..:.::..:::.|..|...|:                     ||....|....    
plant   260 LLT----LGLVVYYAPIVVFLVFARFNGK---------------------FVPRELDGQYF---- 295

  Fly   397 RVEYADAGVLRSMFWIYVVGLIWTVEFIFACQQFALAAAVAFWYFQKPTSTPTFYAIGKLVKYHL 461
             .|:.:...:.:.:.:.::.:||::..:...|.:.::.|:|.|||.|..|.|.     |.::..|
plant   296 -CEWKEDSWVPAYYALAILTMIWSLAVMVEMQVYVISGAIAQWYFSKEDSIPK-----KCIRSSL 354

  Fly   462 --------GTVAKGSFVITIFKIPRLILTYLYAKLKKGEDKGSECAACCLKCCICGFWLLEKFIR 518
                    ||:.....:|.|.::.|.|:.      ...|:.........|:||...   |...:.
plant   355 RNAFGQSFGTICVSGLLICIVRVVRAIVD------NAREENTQGIVNMVLRCCANA---LLGALD 410

  Fly   519 FLNHNAYTVVAIESINFCPAAGIAWNAMATNVLQVATINSVGDFILFLGKVVV----------AA 573
            :||.......||....:|.:|.:.:..:..|:|....:.:|...|| .|.|.|          |.
plant   411 YLNKFTINFAAITGEAYCTSAKMTYELLRRNLLSAVFVETVSTRIL-TGIVFVLSAAYAVATWAV 474

  Fly   574 LSGLIGIVLLKDKPGLNFY----MAPVIIIIIFSFFIAHIILSLFEMVVDTLFLCVCEDK 629
            |.|:..:       |::.|    :|.|::|:|.:||: |::    :.|:||:::|...|:
plant   475 LRGVSNL-------GIDSYVVAVLAWVLLIVILAFFV-HVL----DDVIDTIYVCYAIDR 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl1NP_647884.1 DUF4481 <207..>316 CDD:291466 22/132 (17%)
Choline_transpo 286..629 CDD:282384 74/367 (20%)
AT4G38640NP_568045.1 Choline_transpo 229..523 CDD:367975 69/351 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1362
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000381
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12385
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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