DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl1 and AT3G03700

DIOPT Version :10

Sequence 1:NP_647884.1 Gene:Ctl1 / 38523 FlyBaseID:FBgn0035523 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_187020.1 Gene:AT3G03700 / 821183 AraportID:AT3G03700 Length:482 Species:Arabidopsis thaliana


Alignment Length:448 Identity:89/448 - (19%)
Similarity:161/448 - (35%) Gaps:81/448 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 FVGDIYSTWHIIAMVCGLALLISI-ALVTMMHWLSRIVSWIICVLVIVASVALTVALWYAYYNIR 260
            |.|.::|...:|::   |.::::| .|::.......:..|...:|..||...:....|...: |.
plant    57 FKGLLFSQLTLISL---LVIVLTIRGLISASTHHFHLKKWYPPLLASVAVSGIASLAWQCIF-IY 117

  Fly   261 NKSGVNTQYSMLEEFVRNQQAVLTLAVLATITMIILIVVIYFLKNKLAGLSALFEEAGQCMMNLP 325
            |.|             |..:|...|:.:.|.::.||:|:|....:  ||:.|:| .......:|.
plant   118 NPS-------------RAVKATFWLSPILTCSVGILLVLIGSAVD--AGIGAVF-VLFAITQSLY 166

  Fly   326 GLLIAPLLAFL-----VLIAFLSFWVAVIICLATASSPGQSPIAPFDNSKAHQQPLPANALFVSN 385
            |..|.|.|.:.     :..||.......::||:...|...|.........|.......:.||:| 
plant   167 GCWITPRLEYTDKILSLATAFPPARTREVVCLSIIVSVVYSGFLVTGIGGATSTRTNLDILFIS- 230

  Fly   386 STDVNDLRPNARVEYADAGVLRSMFWIYVVGLIWTVEFIFACQQFALAAAVAFWYFQKPTSTPTF 450
                                      :.::.|.||::.|...||.|::.| .:..|........:
plant   231 --------------------------VIIISLAWTMQVIKNVQQVAISRA-RYVNFAHGEDMDAW 268

  Fly   451 YAIGKLVKYHLGTVAKGSFVITIFKIPRLILTYLYAKLKKGED-----KGSECAACCLKCCICGF 510
            .|....:|:..|::..||.::.|....|..:..:  .|..|..     .|::|.:.         
plant   269 NAFRITMKHLTGSICVGSTLVPIIVFIRGSIRSV--NLMSGSSDEVMYSGADCFST--------- 322

  Fly   511 WLLEKFIRFLNHNAYTVVAIESINFCPAAGIAWNAM-ATNVLQVATINSVGDFILFLGKVVVAAL 574
             :..|.|...|...:..|......|..|:...|... :|..|:....:.:.....||..|.|.|:
plant   323 -IANKLITLGNRWGFVHVGTYDKGFMEASSDTWKKFRSTTGLEKLIDSDLTSSFCFLSAVSVGAV 386

  Fly   575 SGL-IGIVLL---KDKPGLNFYMAPVIIIIIFSFFIAHIILSLFEMVVDTLFLCVCED 628
            |.| .||.:|   ||     :.:...:...|..:|:..:.|:..:..|...::...||
plant   387 SSLTAGIWMLLIHKD-----YALEVTLYAFIIGYFVGRVGLAWLQACVLAYYVAYSED 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl1NP_647884.1 Choline_transpo 287..629 CDD:461337 71/357 (20%)
AT3G03700NP_187020.1 Choline_transpo <226..441 CDD:461337 50/259 (19%)

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