DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ctl1 and slc44a1b

DIOPT Version :9

Sequence 1:NP_647884.1 Gene:Ctl1 / 38523 FlyBaseID:FBgn0035523 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_021336769.1 Gene:slc44a1b / 503933 ZFINID:ZDB-GENE-050309-63 Length:752 Species:Danio rerio


Alignment Length:702 Identity:234/702 - (33%)
Similarity:362/702 - (51%) Gaps:113/702 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RSCTDTCWLAIYIIFWLFLIVIAIFSFVYGNPLRIINGYDSFGNTCGVKYNEKFQGFPLSGMNTL 85
            |||||..|..::.:|.:.:..|..|:...|...|::.||||:|||||.: ||..:|..|||::..
Zfish    32 RSCTDLPWFLLFTLFLVGMCGICGFTIATGGAARLVFGYDSYGNTCGQR-NEPIEGVRLSGLDHT 95

  Fly    86 DKPELFYFD------VKELKKSLKICVKSCPAKTMTKGSELLEYYS------QTGTQLCKYDYNM 138
            |:..:|:.|      ::...||:.:||..||.:      |||.||.      ..|::||.|:...
Zfish    96 DRKFVFFLDPCNIDIIQRKIKSMALCVSQCPTE------ELLTYYDLKRFAMMNGSELCSYELPG 154

  Fly   139 QQLTTAGNDAKTFNFLGPCPSFPVHESS--PVLHRCVPKGT------GEKVQNYY---DMLNNWD 192
            .:..:.   .:.|:   .||..||.||.  ||.:||.|...      .|.|..:.   .|||   
Zfish   155 HKYPSL---PERFD---KCPKLPVPESKALPVFNRCTPVDISCYAKFAEAVVTFVSDNSMLN--- 210

  Fly   193 VAQQFVGDIYSTWHIIAMVCGLALLISIALVTMMHWLSRIVSWIICVLVIVASVALTVALWYAYY 257
               :.:..:.::..||..:|.|||::|:.|:.::.::|.::.||:..||::.|:..|..||:.|.
Zfish   211 ---RLIAGVAASKEIIVGLCLLALVLSMILMVIIRYISAVLVWILTALVVLGSLGGTSVLWWLYI 272

  Fly   258 NIRNKSGVNTQYSMLEEFVRNQ-------------QAVLTLAVLATITMIILIVVIYFLKNKLAG 309
            :.|    :....:|.::....:             |.:|..||.||:...||::::.|::.::|.
Zfish   273 DYR----MTMNETMTKDLTETEEPNGGMKPTKDHAQGLLIYAVSATVFTGILLLLMLFMRKRVAL 333

  Fly   310 LSALFEEAGQCMMNLPGLLIAPLLAFLVLIAFLSFWVAVIICLATASSPGQSPIAPFDNSKAHQQ 374
            ..|||..||:..::||.|.:.|...||.|..|..:|:.|::.|.|..:|.::             
Zfish   334 TIALFHVAGKVFIHLPLLALQPFCTFLALSLFWVYWIMVLLFLGTTGNPEKN------------- 385

  Fly   375 PLPANALFVSNSTDVNDLRPNARVEYADAGVLRSMFWIYVVGLIWTVEFIFACQQFALAAAVAFW 439
                              .....||:..:|.|:.|.|.:.|||||..|||.||||..:|.||..:
Zfish   386 ------------------EDTGLVEFRLSGALQYMTWYHAVGLIWISEFILACQQMTVAGAVVTY 432

  Fly   440 YFQKPTS----TPTFYAIGKLVKYHLGTVAKGSFVITIFKIPRLILTYLYAKLKKGEDKGSECAA 500
            ||.:..:    ||...::.:||:|||||||||||:||:.|||||||.|::.:||   .|.:.||.
Zfish   433 YFTRDKTKLPVTPILSSVLRLVRYHLGTVAKGSFIITLVKIPRLILMYIHNQLK---GKENACAR 494

  Fly   501 CCLKCCICGFWLLEKFIRFLNHNAYTVVAIESINFCPAAGIAWNAMATNVLQVATINSVGDFILF 565
            |.||.|||..|.|||.:.:||.|||...||.|.:||.:|..|:..:..|.|:|||||:||||:||
Zfish   495 CMLKACICCLWCLEKCLNYLNQNAYAATAINSTSFCTSARDAFMILVENALRVATINTVGDFVLF 559

  Fly   566 LGKVVVAALSGLIGIVLLKDKPGLNFYMAPVIIIIIFSFFIAHIILSLFEMVVDTLFLCVCED-K 629
            ||||::...:...|::.|..:.....::.|:||:.:|:|.:||..||:||:|||.||||...| |
Zfish   560 LGKVLIVTCTAFAGVLALNYQRDYTEWVLPLIIVCLFAFLVAHCFLSIFEIVVDVLFLCFAIDTK 624

  Fly   630 TLNGRSGR----------WAQSNLAKLVGEE-----PLQPGEEPPIEVVQMM 666
            ..||..||          :.:::...:..||     ..:|.||..:..|:.|
Zfish   625 YNNGTPGREFYMDKALMEFVENSRRSMAMEERGRSKRARPKEEVELTEVKAM 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl1NP_647884.1 DUF4481 <207..>316 CDD:291466 33/121 (27%)
Choline_transpo 286..629 CDD:282384 139/347 (40%)
slc44a1bXP_021336769.1 Choline_transpo 313..622 CDD:309592 136/342 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 268 1.000 Domainoid score I1817
eggNOG 1 0.900 - - E1_KOG1362
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 396 1.000 Inparanoid score I1914
OMA 1 1.010 - - QHG45602
OrthoDB 1 1.010 - - D167290at33208
OrthoFinder 1 1.000 - - FOG0000381
OrthoInspector 1 1.000 - - otm26241
orthoMCL 1 0.900 - - OOG6_104769
Panther 1 1.100 - - LDO PTHR12385
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4525
SonicParanoid 1 1.000 - - X2976
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.870

Return to query results.
Submit another query.