DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl1 and Ctl2

DIOPT Version :9

Sequence 1:NP_647884.1 Gene:Ctl1 / 38523 FlyBaseID:FBgn0035523 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_651670.1 Gene:Ctl2 / 43440 FlyBaseID:FBgn0039637 Length:796 Species:Drosophila melanogaster


Alignment Length:796 Identity:191/796 - (23%)
Similarity:333/796 - (41%) Gaps:197/796 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RPKYRSCTDTCWLAIYIIF---WLFLIVIAIFSFVYGNPLRIINGYDSFGNTCGVKYNEKFQGFP 78
            |.:.|||||...|.::::|   |.|   ||.::...|:..:::...|||...||:.         
  Fly    25 RQRDRSCTDVPCLLLFVLFLGGWAF---IAQYAIRNGDLNKLLVPTDSFNRKCGMD--------- 77

  Fly    79 LSGMNTLDKPELFYFDVKELKKSL---------KICVKSCPAK-----TMTKGSELLEYYSQTGT 129
             ||:  |:|..||:||:.:....|         ::||::||.:     ||.......|.:|:.  
  Fly    78 -SGV--LNKKNLFFFDLNQCIDPLVPITGCDTPQVCVETCPRETFVWDTMKDKQSFAELHSRL-- 137

  Fly   130 QLCKYDYNMQQLTTAGN--DA-----------KTFNFLGPC------------PSF--------- 160
             :|..:.:..|:.|..:  ||           |:..||..|            |||         
  Fly   138 -ICLSEEHKAQIRTKSDIQDAINQNQCARWYIKSAPFLKRCLFEFSQGVCDYIPSFLLNGGRSRR 201

  Fly   161 ----------------------------------------PVHESSPVLHRC------------- 172
                                                    ||.| .|:: :|             
  Fly   202 ELHMLPGNATTEVQMQADVMYQKMTDAQALVVPQANGKQTPVDE-EPII-QCKRRLNEAVIKEKM 264

  Fly   173 ------VPKGTGEKVQNYYDMLNNWD-VAQQFVGDIYSTWHIIAMVCGLALLISIALVTMMHWLS 230
                  :.|..|..|.::|:..|:.. :.::.|.|:.::|.|:.:.|...|:.|:..:.:|.|||
  Fly   265 MQTDTRLAKLVGNMVAHFYNGTNDAQLLGEKIVEDLVNSWSIVLVACFCTLVASLIYIALMRWLS 329

  Fly   231 RIVSWIICVLVIVASVALTVALWYA---YYNIRNK-----SGVNTQYSMLEEFVRNQQAVLTLAV 287
            ..:.|.....|:   :.|.|.::::   |.:..|.     .|:|. :|.::..::||...|.|::
  Fly   330 APILWFSIFGVL---IGLLVGIYFSVKQYIHWENTPTVPVHGLNL-HSTVKNVLQNQNTWLYLSI 390

  Fly   288 LATITMIILIVVIYFLKNKLAGLSALFEEAGQCMMNLPGLLIAPLLAFLVLIAFLSFWVAVIICL 352
            ...:..:::::::..|:.::....||.:|..:.:.::...:..|:.::::.||.::|.:.|.:.|
  Fly   391 FVGVCFVVILLLVIVLRKRIRIAIALTKEGSKAVSSVISTVFFPIFSWILFIAAIAFAIGVGLYL 455

  Fly   353 ATASSPGQSPIAPFDNSK-------AHQQPLPANALFVSNSTDVNDLRPNARVEYADAGVLRSMF 410
            .:...|....:.....|.       ..:.|       ..|.|.....:|....:|.... |.|.|
  Fly   456 GSIGDPSFRMVRQLTKSGEVTTEDCVCEGP-------AINYTVGGSCKPEVFQQYCSVR-LTSFF 512

  Fly   411 -----------------------WIY---VVGLIWTVEFIFACQQFALAAAVAFWYFQ-KPTSTP 448
                                   |..   |.|.:|...||.|.....||:..|.||:. |....|
  Fly   513 QNRNPCLNTTCSFDSINNPIEIKWAIFYNVFGFLWLSFFISAFSYMVLASTFARWYWTFKKRDVP 577

  Fly   449 TF---YAIGKLVKYHLGTVAKGSFVITIFKIPRLILTYLYAKLKKGEDKGSECAACCLKCCICGF 510
            .|   .|..:...|||||||.||.::.|.::.||:|.|::.||||.::..:....||::|.   |
  Fly   578 YFTLTRAFFQTAVYHLGTVAFGSLILAIVRLIRLVLEYIHEKLKKYDNAVTRAILCCMRCF---F 639

  Fly   511 WLLEKFIRFLNHNAYTVVAIESINFCPAAGIAWNAMATNVLQVATINSVGDFILFLGKVVVAALS 575
            ||||.|::|||.|||.:.||...|||.:|..::|.:..|.|:|.|::.|.||:.||.|:::.|.:
  Fly   640 WLLETFLKFLNRNAYIMCAIHGKNFCSSAADSFNLIMRNFLRVVTLDQVTDFLFFLSKLLLTAGA 704

  Fly   576 GLIGIVLLKDKPG---LNFYMAPVIIIIIFSFFIAHIILSLFEMVVDTLFLCVCEDKTLNGRSGR 637
            |......|.:.|.   ||:...|..:::|.:|.|..:...::...|||||||..||...|..|..
  Fly   705 GASTYYFLDNNPSIIRLNYIAVPTTVVVIAAFLITSVFFGVYSTAVDTLFLCFLEDCERNDGSPE 769

  Fly   638 ---WAQSNLAKLVGEE 650
               :....|.|::|::
  Fly   770 KPFFMSKQLMKILGKK 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl1NP_647884.1 DUF4481 <207..>316 CDD:291466 24/116 (21%)
Choline_transpo 286..629 CDD:282384 104/382 (27%)
Ctl2NP_651670.1 Choline_transpo 407..761 CDD:282384 103/364 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454061
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1362
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I1549
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D329225at2759
OrthoFinder 1 1.000 - - FOG0000381
OrthoInspector 1 1.000 - - otm3077
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12385
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.900

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