DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl1 and SPCC1682.11c

DIOPT Version :9

Sequence 1:NP_647884.1 Gene:Ctl1 / 38523 FlyBaseID:FBgn0035523 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_587804.1 Gene:SPCC1682.11c / 2538935 PomBaseID:SPCC1682.11c Length:574 Species:Schizosaccharomyces pombe


Alignment Length:463 Identity:94/463 - (20%)
Similarity:164/463 - (35%) Gaps:167/463 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 ALVTMMHWLSRIVSWIICVLVI-------VASVALTVALWYAYYNIRNKSGVNTQYSMLEEFVRN 278
            |::.||  ||  |.|:.|::.|       :|||.||:..:..|  :...|.::     ||..::.
pombe   191 AIICMM--LS--VIWLFCLVAIPRFLYFLLASVPLTMFAFAVY--LLKASRIH-----LETSIQP 244

  Fly   279 QQAVLTLAVLATITMIILIVVIYFLKNKLAGLSALFEEAGQCMMNLPGLLIAPLLAF-LVLIAFL 342
            :..:||    ..|.::..|::.|::..:.......|.     ::.|...:||.:... |:.|:||
pombe   245 KLMLLT----GIILLVAPILLSYYVWRRRIHFETSFN-----IIRLACRVIADIPQITLIFISFL 300

  Fly   343 -SFWVAVIICLATASSPGQSPIAPFDNSKAHQQPLPANALFVSNSTDVNDLRPNARVEYADAGVL 406
             ||:|.:.|.:...:                       .||:..||.|..:           .||
pombe   301 FSFYVLIFIWVRLFA-----------------------RLFLRGSTLVGSV-----------WVL 331

  Fly   407 RSMFWI----YVVGLIWTVEFIFACQQFALAAAVAFWYFQKPT---STPT------FYAIGKLVK 458
            ....|:    |.:..:|...|..|.|...:::.|:.|:|.:.|   :|.|      ||.:   |.
pombe   332 PRSSWVLASFYSLHFLWLCTFFHALQCAIISSIVSQWFFYRDTKSSATKTNLVSHFFYHV---VS 393

  Fly   459 YHLGTVAKGSFVITIFKIP------------RLI---------------LTYLYAKLKKGEDKGS 496
            ...|..|..||::.|.|:|            |::               ||..||.:.......:
pombe   394 NQYGLCAFSSFLVVITKVPLHFLPTWLRHVSRIVYYMFSKTSASYVTSPLTLAYASIYSVPYMNA 458

  Fly   497 ECAACCLKCCICGFWLLEKFIRF------LNHNAYTVVAIESINFCPAAGIAWNAMATNVLQVAT 555
            ..|          .:.:|:..|.      ...:.||::|..|:........:||           
pombe   459 SKA----------LYQIEQLNRVGLRRRSYYFSKYTLLAARSLLAIGVGVTSWN----------- 502

  Fly   556 INSVGDFILFLGKVVVAALSGLIGIVLLKDKPGLNFYMAPVIIIIIFSFFIAHIILSLFE----M 616
             .|:.:..:|.|.:|     ||:|                        .|:|.:|:...|    |
pombe   503 -YSIHENGVFYGYIV-----GLLG------------------------GFLAWLIIGAIEGGLSM 537

  Fly   617 VVDTLFLC 624
            :||.|.:|
pombe   538 IVDALLIC 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl1NP_647884.1 DUF4481 <207..>316 CDD:291466 24/101 (24%)
Choline_transpo 286..629 CDD:282384 74/391 (19%)
SPCC1682.11cNP_587804.1 Choline_transpo 251..549 CDD:282384 74/388 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1362
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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