DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl1 and SLC44A1

DIOPT Version :9

Sequence 1:NP_647884.1 Gene:Ctl1 / 38523 FlyBaseID:FBgn0035523 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_006717090.1 Gene:SLC44A1 / 23446 HGNCID:18798 Length:737 Species:Homo sapiens


Alignment Length:633 Identity:225/633 - (35%)
Similarity:349/633 - (55%) Gaps:58/633 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RSCTDTCWLAIYIIFWLFLIVIAIFSFVYGNPLRIINGYDSFGNTCGVKYNEKFQGFPLSGMNTL 85
            |||||..||.::|:|.:.:..|..||...|...|:::||||:||.||.| |.|.:..|.|||:..
Human    42 RSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVSGYDSYGNICGQK-NTKLEAIPNSGMDHT 105

  Fly    86 DKPELFYFD------VKELKKSLKICVKSCPAKTMTKGSELLEYYSQTGTQLCKYDYNMQQLTTA 144
            .:..:|:.|      :....||:.:||.:||.:.:...|::.::....|:.||.|:....:.||:
Human   106 QRKYVFFLDPCNLDLINRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTS 170

  Fly   145 GNDAKTFNFLGPCPSFPVHESSPV--LHRCVPKGT---GEKVQNYYDMLNNWDVAQQFVGDIYST 204
            ...:..      ||..||..|:|:  .|||.|...   .:..:.....:::..|..:.:..:.::
Human   171 PKSSVL------CPKLPVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTS 229

  Fly   205 WHIIAMVCGLALLISIALVTMMHWLSRIVSWIICVLVIVASVALTVALWYAYYNIRNKSGVNTQY 269
            ..||..:|.|:|::|:.|:.::.::||::.||:.:|||:.|:..|..||:.|...|.........
Human   230 KEIILGLCLLSLVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTP 294

  Fly   270 SMLEEFVRNQQAVLTLAVLATITMIILIVVIYFLKNKLAGLSALFEEAGQCMMNLPGLLIAPLLA 334
            ..|:....|.:|:|..|:.||:..:||.:::..::.::|...|||..||:..::||.|:..|...
Human   295 EQLQIAEDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWT 359

  Fly   335 FLVLIAFLSFWVAVIICLATASSPGQSPIAPFDNSKAHQQPLPANALFVSNSTDVNDLRPNARVE 399
            |..|:.|..:|:..::.|.|..||.|:                                ....||
Human   360 FFALVLFWVYWIMTLLFLGTTGSPVQN--------------------------------EQGFVE 392

  Fly   400 YADAGVLRSMFWIYVVGLIWTVEFIFACQQFALAAAVAFWYFQKPTS----TPTFYAIGKLVKYH 460
            :..:|.|:.|:|.:||||||..|||.||||..:|.||..:||.:...    ||...::.:|::||
Human   393 FKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKRNLPFTPILASVNRLIRYH 457

  Fly   461 LGTVAKGSFVITIFKIPRLILTYLYAKLKKGEDKGSECAACCLKCCICGFWLLEKFIRFLNHNAY 525
            |||||||||:||:.||||:||.|::::||   .|.:.||.|.||.|||..|.|||.:.:||.|||
Human   458 LGTVAKGSFIITLVKIPRMILMYIHSQLK---GKENACARCVLKSCICCLWCLEKCLNYLNQNAY 519

  Fly   526 TVVAIESINFCPAAGIAWNAMATNVLQVATINSVGDFILFLGKVVVAALSGLIGIVLLKDKPGLN 590
            |..||.|.|||.:|..|:..:..|.|:|||||:||||:||||||::...:||.||:||..:....
Human   520 TATAINSTNFCTSAKDAFVILVENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYT 584

  Fly   591 FYMAPVIIIIIFSFFIAHIILSLFEMVVDTLFLCVCEDKTLN-GRSGR 637
            .::.|:||:.:|:|.:||..||::|||||.||||...|...| |..||
Human   585 VWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGR 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl1NP_647884.1 DUF4481 <207..>316 CDD:291466 33/108 (31%)
Choline_transpo 286..629 CDD:282384 141/346 (41%)
SLC44A1XP_006717090.1 Choline_transpo 311..622 CDD:282384 141/345 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 268 1.000 Domainoid score I1871
eggNOG 1 0.900 - - E1_KOG1362
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11137
Inparanoid 1 1.050 406 1.000 Inparanoid score I1901
Isobase 1 0.950 - 0 Normalized mean entropy S5638
OMA 1 1.010 - - QHG45602
OrthoDB 1 1.010 - - D167290at33208
OrthoFinder 1 1.000 - - FOG0000381
OrthoInspector 1 1.000 - - otm41764
orthoMCL 1 0.900 - - OOG6_104769
Panther 1 1.100 - - LDO PTHR12385
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4525
SonicParanoid 1 1.000 - - X2976
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

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