DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ctl1 and SLC44A3

DIOPT Version :9

Sequence 1:NP_647884.1 Gene:Ctl1 / 38523 FlyBaseID:FBgn0035523 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001107578.1 Gene:SLC44A3 / 126969 HGNCID:28689 Length:653 Species:Homo sapiens


Alignment Length:650 Identity:206/650 - (31%)
Similarity:324/650 - (49%) Gaps:73/650 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SKDGEGEAQNNRPK-YRSCTDTCWLAIYIIFWLFLIVIAIFSFVYGNPLRIINGYDSFGNTCGVK 69
            |.:|....:..||: ||.||||.||.::.:||..|:.|..:|.|.|...|::.|||||||.|| |
Human    11 SAEGAPRQREWRPQIYRKCTDTAWLFLFFLFWTGLVFIMGYSVVAGAAGRLLFGYDSFGNMCG-K 74

  Fly    70 YNEKFQGFPLSGMNTLDKPELFYFDVKELK------KSLKICVKSCPAKTMTKGSELLEYYSQTG 128
            .|...:|.||||.:...|..:|:.:...|:      ..:.:||.:||.:.:....|:..:.:.:|
Human    75 KNSPVEGAPLSGQDMTLKKHVFFMNSCNLEVKGTQLNRMALCVSNCPEEQLDSLEEVQFFANTSG 139

  Fly   129 TQLCKYDYNMQQLTTAGNDAKTFNFL-GP-----CPSFPV--HESSPVLHRCVPKGTGEKVQNYY 185
            :.||.|..|            :||:. .|     ||..||  .:|.|:.:||||: |.|....:.
Human   140 SFLCVYSLN------------SFNYTHSPKADSLCPRLPVPPSKSFPLFNRCVPQ-TPECYSLFA 191

  Fly   186 DML-NNWDVAQQFVGDIYSTWHIIAMVCGLALLISIALVTMMHWLSRIVSWIICVLVIVASVALT 249
            .:| |:.|...:.:..|.|....|..:|.|||.:|:|::....:::.::..|...|||:..:.:.
Human   192 SVLINDVDTLHRILSGIMSGRDTILGLCILALALSLAMMFTFRFITTLLVHIFISLVILGLLFVC 256

  Fly   250 VALWYAYYNIRNKSGVNTQYSMLEEFVRNQQAVLTLAVLATITMIILIVVIYFLKNKLAGLSALF 314
            ..||:.||:..|...:.     |:....|.:.||..|:::|....:|:|:|:.|:.::.....||
Human   257 GVLWWLYYDYTNDLSIE-----LDTERENMKCVLGFAIVSTGITAVLLVLIFVLRKRIKLTVELF 316

  Fly   315 EEAGQCMMNLPGLLIAPLLAFLVLIAFLSFWVAVIICLATASSPGQSPIAPFDNSKAHQQPLPAN 379
            :...:.:.:.|.||..||..|.:||.|...||||::.|.||.:.                     
Human   317 QITNKAISSAPFLLFQPLWTFAILIFFWVLWVAVLLSLGTAGAA--------------------- 360

  Fly   380 ALFVSNSTDVNDLRPNARVEYADAGVLRSMFWIYVVGLIWTVEFIFACQQFALAAAVAFWYFQK- 443
                       .:....:|||.....:|.|:..:::|||||.|||.||||..:|.||...||.: 
Human   361 -----------QVMEGGQVEYKPLSGIRYMWSYHLIGLIWTSEFILACQQMTIAGAVVTCYFNRS 414

  Fly   444 ---PTSTPTFYAIGKLVKYHLGTVAKGSFVITIFKIPRLILTYLYAKLKKGEDKGSECAACCLKC 505
               |...|...::..|..||.|||.||||:|::.:|||:|:.|:...||  |.:....:....:|
Human   415 KNDPPDHPILSSLSILFFYHQGTVVKGSFLISVVRIPRIIVMYMQNALK--EQQHGALSRYLFRC 477

  Fly   506 CICGFWLLEKFIRFLNHNAYTVVAIESINFCPAAGIAWNAMATNVLQVATINSVGDFILFLGKVV 570
            |.|.||.|:|::..||.||||..||...:||.:|..|:..::.|.....:||..||||:|||||:
Human   478 CYCCFWCLDKYLLHLNQNAYTTTAINGTDFCTSAKDAFKILSKNSSHFTSINCFGDFIIFLGKVL 542

  Fly   571 VAALSGLIGIVLLKDKPGLNFYMAPVIIIIIFSFFIAHIILSLFEMVVDTLFLCVCEDKTLNGRS 635
            |...:...|::..........:..|::::..|::.:||..||:||.|:|.||||...|...|..|
Human   543 VVCFTVFGGLMAFNYNRAFQVWAVPLLLVAFFAYLVAHSFLSVFETVLDALFLCFAVDLETNDGS 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl1NP_647884.1 DUF4481 <207..>316 CDD:291466 28/108 (26%)
Choline_transpo 286..629 CDD:282384 114/346 (33%)
SLC44A3NP_001107578.1 Choline_transpo 288..601 CDD:282384 114/346 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 632..653
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149880
Domainoid 1 1.000 268 1.000 Domainoid score I1871
eggNOG 1 0.900 - - E1_KOG1362
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 406 1.000 Inparanoid score I1901
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45602
OrthoDB 1 1.010 - - D167290at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41764
orthoMCL 1 0.900 - - OOG6_104769
Panther 1 1.100 - - O PTHR12385
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2976
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.770

Return to query results.
Submit another query.