DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctl1 and slc44a1

DIOPT Version :9

Sequence 1:NP_647884.1 Gene:Ctl1 / 38523 FlyBaseID:FBgn0035523 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_002934036.2 Gene:slc44a1 / 100380051 XenbaseID:XB-GENE-984336 Length:651 Species:Xenopus tropicalis


Alignment Length:716 Identity:240/716 - (33%)
Similarity:380/716 - (53%) Gaps:96/716 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCAESKDGEGEAQNNRPKYR-----SCTDTCWLAIYIIFWLFLIVIAIFSFVYGNPLRIINGYD 60
            |||.      |..|:::..:|     ||||..||.::|:|.:.:..|..||...|...|:::|||
 Frog     1 MGCC------GSTQSSKRDWRPLEEHSCTDIPWLLLFILFCVGMGFICGFSIATGAASRLVSGYD 59

  Fly    61 SFGNTCGVKYNEKFQGFPLSGMNTLDKPELFYFD------VKELKKSLKICVKSCPAKTMTKGSE 119
            |:||.||.| |.|.:||..||::..:...:|:.|      |....||:.:||..||.:.:...::
 Frog    60 SYGNICGQK-NTKIEGFVNSGLDHSNHKYVFFLDPCKLDLVNRKIKSIALCVSECPREELQTLND 123

  Fly   120 LLEYYSQTGTQLCKYDYNMQQLTTAGNDAKTFNFLGPCPSFPVHESSPV--LHRCVPKGT---GE 179
            :.::....|:.||.|.....|.||..:.:..      ||..||.:|:|:  .|||.|...   .:
 Frog   124 VKKFAETNGSALCDYSLTPSQYTTDSSASSL------CPKLPVPKSAPIPFFHRCAPVNISCYAK 182

  Fly   180 KVQNYYDMLNNWDVAQQFVGDIYSTWHIIAMVCGLALLISIALVTMMHWLSRIVSWIICVLVIVA 244
            ..:.....:::..|..:.:..:.::..||..:|.|:|::|:.|:.::.::||::.|||.:||::.
 Frog   183 FAEALITFVSDNSVLHRLISGVMTSKEIIMGLCLLSLVLSMILMVIIRYISRVLVWIITILVVLG 247

  Fly   245 SVALTVALWYAYYNIRNKSGVNTQYSMLEEFVRNQQAVLTLAVLATITMIILIVVIYFLKNKLAG 309
            |:..|..||:.|.:.:.....|.....|:....|.||:|..|:.||:..:||::::..::.::|.
 Frog   248 SLGGTGVLWWLYADKKKSFNENLPPDQLQVSKDNLQALLVYAIAATVFTVILLLMMLIMRKRVAL 312

  Fly   310 LSALFEEAGQCMMNLPGLLIAPLLAFLVLIAFLSFWVAVIICLATASSPGQSPIAPFDNSKAHQQ 374
            ..|||..||:..::||.|:..|...|..|:.|..:||.|::.|.||..|                
 Frog   313 TIALFHVAGKVFIHLPLLVFQPFWTFFALLLFWVYWVMVLLFLGTAGDP---------------- 361

  Fly   375 PLPANALFVSNSTDVNDLRPNARVEYADAGVLRSMFWIYVVGLIWTVEFIFACQQFALAAAVAFW 439
                       ||:....     ||:...|.|:.|:|.::|||||..|||.||||..:|.||..:
 Frog   362 -----------STNEQGF-----VEFRINGPLQYMWWYHLVGLIWISEFILACQQMTIAGAVVTY 410

  Fly   440 YFQKPTS----TPTFYAIGKLVKYHLGTVAKGSFVITIFKIPRLILTYLYAKLKKGEDKGSECAA 500
            ||.:..:    ||...::.:|::|||||||||:|:||:.||||:||.|::::||   .|.:.||.
 Frog   411 YFTRNKNDLPFTPILASVNRLIRYHLGTVAKGAFIITLVKIPRMILMYIHSQLK---GKENACAR 472

  Fly   501 CCLKCCICGFWLLEKFIRFLNHNAYTVVAIESINFCPAAGIAWNAMATNVLQVATINSVGDFILF 565
            |.||.|||..|.|||.:.:||.||||..||.|.|||.:|..|...:..|||:||.||:||||:||
 Frog   473 CMLKSCICCLWCLEKCLAYLNQNAYTATAINSTNFCTSAKDALVILVENVLRVAAINTVGDFMLF 537

  Fly   566 LGKVVVAALSGLIGIVLLKDKPGLNFYMAPVIIIIIFSFFIAHIILSLFEMVVDTLFLCVCEDKT 630
            |||:::.:.:||.|::||..:.....::.|:||:.:|:|.:||..||::|||||.||||...|..
 Frog   538 LGKILIVSSTGLAGVMLLNYQRDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTK 602

  Fly   631 LNGRSGRWAQSNLAKLVGEEPLQPGEEPPIEVVQMMPIN------KQPFSITRLPQSDPEVAPMS 689
            .|..|                  ||:|..::.|.|..:.      |:|.|..    ...|:.||:
 Frog   603 YNDGS------------------PGKEFYMDKVLMEFVENSRRAMKEPGSAA----EGRELKPMA 645

  Fly   690 A 690
            :
 Frog   646 S 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctl1NP_647884.1 DUF4481 <207..>316 CDD:291466 34/108 (31%)
Choline_transpo 286..629 CDD:282384 140/346 (40%)
slc44a1XP_002934036.2 Choline_transpo 290..600 CDD:367975 139/344 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 264 1.000 Domainoid score I1881
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11137
Inparanoid 1 1.050 399 1.000 Inparanoid score I1887
OMA 1 1.010 - - QHG45602
OrthoDB 1 1.010 - - D167290at33208
OrthoFinder 1 1.000 - - FOG0000381
OrthoInspector 1 1.000 - - otm48984
Panther 1 1.100 - - LDO PTHR12385
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2976
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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