DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1273 and fndc1

DIOPT Version :9

Sequence 1:NP_647883.1 Gene:CG1273 / 38522 FlyBaseID:FBgn0035522 Length:1168 Species:Drosophila melanogaster
Sequence 2:XP_003200760.2 Gene:fndc1 / 557836 ZFINID:ZDB-GENE-041210-332 Length:1645 Species:Danio rerio


Alignment Length:1050 Identity:185/1050 - (17%)
Similarity:335/1050 - (31%) Gaps:333/1050 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 ETSAAKSLYRSLR-----------LDTESVEIKRIMDEQVVRSAAILKEAQTVPTSQTQLEKRLM 283
            :|.:..|::.|:|           |.|.|...|...||:             .||:.:.:|:   
Zfish   500 QTRSYHSIFSSVRGSVRNGGSKSNLHTSSTHTKDREDEE-------------KPTADSPIEE--- 548

  Fly   284 KKGSTPATPPVHPKPNPNTTP---------------KPKN-PLLRSHSADEEPDIDVENAPVIQG 332
            |.|:..||...:|:.:.|.:|               ||.| .::...|.|:.|......:.::  
Zfish   549 KTGANEATEDTNPERSNNASPQTQEHSKLSPDTKESKPSNSDIVPKTSEDKRPPWTPRTSSIV-- 611

  Fly   333 SFEGSFEITKTDADIARKKTPPT--------RAYQAASSTLPPKAIA----VTPFS--------- 376
                         ||:|.:.|.:        |:...:||:|..::.|    :|..|         
Zfish   612 -------------DISRLRRPSSRSGSRSRMRSEDTSSSSLNQESAATRKDLTAVSYPDGQKSHN 663

  Fly   377 -LRVKPKKPSI--------EKLTTVLPQQLPTGGPISSTRATTKATKATTTTTKRTTTSTTRKTT 432
             :.|....||:        |.:....|....:..|..|:.|::.::..::.::...::|.||:.:
Zfish   664 QITVTDSMPSVASPQENRPEPVKESEPSSSISSSPTYSSSASSSSSSVSSPSSSLPSSSGTRRFS 728

  Fly   433 T-----------------------TTTPKP-TTTTTTTEATTTTTTST----------------- 456
            :                       |..||| ::::.::::|..|.|||                 
Zfish   729 SGASGAKYPNGRRVGISTRGQRLQTGKPKPDSSSSASSQSTLPTGTSTDNHDTTEVHDTNQKITK 793

  Fly   457 -TTTTPPLPPSTTRATTTSTNTFTYPSVNTPPPNQGG----SLPKLDANLFTTFPILDTQ-PWRP 515
             .|...|:|.........:.::.::.|..|.|...|.    |||..::.:.|:....|.: ||..
Zfish   794 LNTEELPVPKENDDNEEKTVDSTSHSSSRTNPSTTGRSSSFSLPNRNSRIVTSSRRQDGRIPWSR 858

  Fly   516 MHREVPELLPGPPPAFPTKTLPGGTTPTVNHIPQRRIDEFELPFIADNPTPPTAAVAPVTVDPYS 580
            ....|                 |...|.:...|.|...      ::...|.....|:|..   |.
Zfish   859 SASSV-----------------GAGRPIIKGFPSRSTS------VSSQDTSDKNKVSPTV---YP 897

  Fly   581 LGFLNPGLRVQEPKPNL--GPQAQDQDMLFYHNFGSPIFMPGTENI-----ERLGGALVEPHPLP 638
            ...:||    ...||:|  ...:.|.:..:.:.....|:...|:::     .:...|:.|.|. |
Zfish   898 KHKVNP----VSNKPSLLNVKSSNDHEDDYLYEGSKEIWDRQTKDVVSTTAPKTTTAVSESHK-P 957

  Fly   639 VPLIDDVIIPPFKPID---ATMGTGDK----MPFNLD--ASNERFEHLGGGVIAKKPQEKLEKKE 694
            |...::      :.:|   ::|.||.|    :|..|.  .||.|   :...|:::....:...:.
Zfish   958 VQNFEN------ESVDREQSSMSTGFKTVPSVPHKLPTVTSNGR---VRSPVVSRLKGSRFPSRL 1013

  Fly   695 QPSKKEQLEAHVKEANQTAPEKKKAQAHNDQKADQPEITTKVERKQEKVEVTTLATNVPVKSSPK 759
            .|.:..:|.|       :.|:...|.:.|:..|:.|..:.:.........|...:.:|...|...
Zfish  1014 YPLQHRRLGA-------STPDTSAASSQNNPAAESPLTSDRDRAASSNANVRLASGSVSRPSQGL 1071

  Fly   760 PTKSPSLPSLKPTDNSVL-------ADTIGEFFMELLNLPK--EENATATKKPIEDAIESRIEPE 815
            .....|..::.|...|.:       |.|.|..:.......|  ..|.||....:....:...:| 
Zfish  1072 SAGESSSGNISPESRSPVMGSRLRSASTPGNSYKPSFGKGKNGRPNLTAASGKVSSTSDENPKP- 1135

  Fly   816 EEESLDTLKAPS-----VSLSKPNFMNLKEIILQ--RNTPSSILSNET----------------- 856
              ..:..:..|.     :.|.|...||....:||  :..|..::..|.                 
Zfish  1136 --NGVRHITGPDGTKWILDLDKGVLMNENGRVLQDSKGRPRKVILGEDGKTIFDDQGSPLVNQEG 1198

  Fly   857 ------------------------------LEESTTTTMPTTTTRTTTEEPRTTKRNRIRTTSER 891
                                          |:.....|..||||.:||..|.||......||:|.
Zfish  1199 LALFGHGRDSRPVNNPSDKYLTVGGKPIVGLDRPKLRTTTTTTTSSTTTTPTTTTTTPTTTTAEP 1263

  Fly   892 PTMMDDSNLFPSHSKWEFVNSSSAQGFGHNSNMRKVFNQTLQAWVSEDIDKSENLTLNDIKTRIN 956
            .|.|....:.||                     ....:.|....:...:||: .|.:.|.:..:|
Zfish  1264 TTEMVTETVEPS---------------------TLAADPTCPPGLYSRLDKN-GLPILDAEGILN 1306

  Fly   957 NASNIQDISLIFDTLASKLGITPSVPNKFPPFSQNKLKHAPKEEVTRRPIPSSTTTEIPLLIPES 1021
                                          .:|:::|    .||.|..|:|..|||   |.....
Zfish  1307 ------------------------------CYSEDEL----FEESTTIPVPLPTTT---LASTTQ 1334

  Fly  1022 ILPVEREPFIK-PMSSFIDDGSSEVLGAAIPVIGE---AEVEVVDPLNY------EEMLKISQFA 1076
            .|..|..||.. |.|.|...|........:..|.:   |...:.:.|.|      .::::..|.:
Zfish  1335 TLTPETRPFNNTPSSEFDVTGKKRFTAPYVNYIQKDPGAPCSLTEALEYLQVDVLADLMEKDQQS 1399

  Fly  1077 ASSTEPSVHK 1086
            ::..:|..:|
Zfish  1400 SNQKQPPKNK 1409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1273NP_647883.1 None
fndc1XP_003200760.2 FN3 28..108 CDD:214495
FN3 247..341 CDD:238020
FN3 348..439 CDD:238020
FN3 1408..1500 CDD:238020 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23197
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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