DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1273 and Abi3bp

DIOPT Version :9

Sequence 1:NP_647883.1 Gene:CG1273 / 38522 FlyBaseID:FBgn0035522 Length:1168 Species:Drosophila melanogaster
Sequence 2:XP_036015888.1 Gene:Abi3bp / 320712 MGIID:2444583 Length:1682 Species:Mus musculus


Alignment Length:1037 Identity:212/1037 - (20%)
Similarity:332/1037 - (32%) Gaps:336/1037 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 ESVEIKRIMDEQVVRSAAILKEAQTVPTSQTQLEKRLMKKGSTPATPPVHPKPNPNTTP------ 304
            ||..::.....:|..:.|..::..::|::.        |:.|||..|.|.|.|.|.|.|      
Mouse   481 ESRNVEIFTSPEVRPTTAAPQQTTSIPSTP--------KRQSTPKPPRVKPAPEPETRPSAQTTK 537

  Fly   305 ------KPKNPLLRSHSADEEPDIDVENAPVIQGSFEGSFEITKTDADIARKKTPPTRAYQAASS 363
                  ||.:..||.......|::. ::.|.::                     |.|        
Mouse   538 APRKTKKPGHHRLRRPKTTRSPEVP-KSKPALE---------------------PAT-------- 572

  Fly   364 TLPPKAIAVTPFSL--RVKPKKPSIEKLT--TVLPQQLPTGGPISSTRATTKATKATTTTTKRTT 424
                    |||..|  ::.||.|...|.|  ..:||..|...|: :..:...|....|||.....
Mouse   573 --------VTPEILVPKIVPKPPQKPKATRRPEVPQVKPAHEPV-TFGSEAPALAIVTTTDIEPV 628

  Fly   425 TSTTRKTTTTTTPKPTTTTTTTEATTTTTTST-------------TTTTPPLPPSTTRATTTSTN 476
            .:.|:.:.||..|||....|..:.|...||.:             .|:.|||      |:||.  
Mouse   629 ITRTKASVTTLAPKPPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPL------ASTTK-- 685

  Fly   477 TFTYPSVNTPPPNQGGSLPKLDANLFTTFPILDTQPWRPMHREVPELLPGPPPA---FPTKTLPG 538
                 .|..|.|                      :|....|.|||..:..|..:   |.....||
Mouse   686 -----KVRRPRP----------------------KPQTTPHPEVPHTILVPATSLEPFIITEAPG 723

  Fly   539 GTTPTVNHIPQRRIDEFELPFIADNPTPPTAAVAPVTVDPYSLGFLNPGLRVQEPKPNLGPQAQD 603
              |..|..:||:          .|.|.|                         :||....|.|..
Mouse   724 --TTLVPKLPQQ----------PDYPHP-------------------------KPKTTRSPAASP 751

  Fly   604 QDMLFYHNFGSPIFMPGTENIERLGGALVEPHPLPVPLIDDVI--IPPFKPIDATMGTGDKMPFN 666
            .:::     .:|:|.|.|                  ||.:|.:  |.|...::........:.|.
Mouse   752 TELV-----PTPVFEPVT------------------PLKEDPVTTIVPITDLERVTDLETPVAFR 793

  Fly   667 LDASNERFEHLGGGVIAKK---------PQEKLEKKEQPSKKEQLEAHVKEANQTAPEKKKAQAH 722
            .:|.        |..:|.|         |:.:...:.:|..|..|       :..|||.|..   
Mouse   794 TEAP--------GTTLASKISQRTHRPRPRPRPRPRPRPRPKATL-------SPQAPETKTV--- 840

  Fly   723 NDQKADQPEITTKVERKQEKVEVTTLATNVPVKS-----SPKPTKSPSLPSLKPTDNSVLADTIG 782
                   |.:..:....:.:|:|||||.....|.     .|||..||.:...||....|      
Mouse   841 -------PAVVLEPVTLRPEVQVTTLAPQKTQKKHRPSPKPKPVPSPEVTESKPVLPRV------ 892

  Fly   783 EFFMELLNLPKEENATATKKPIEDAIESRIEPEEEESLDTLKAPSVSLSKP-NFMNLKEIILQRN 846
               .|.:.| :.|....||.|.......|..|:.:    |...|...|:|| ...:|:...|...
Mouse   893 ---REPVTL-RTETWVTTKAPKTPKRTRRPRPKPQ----TTPTPETPLTKPVAATDLEPSALSTE 949

  Fly   847 TPSSILSNETLEESTTTTMPTTTTRTTT------------EEPRTTKRNRIRTTSERPTMMDDSN 899
            .|::::....|   |..|:.|...:|||            ..|:||....:..:...||.:....
Mouse   950 VPATVVLATAL---TPVTLRTKAPKTTTLAPNVQRTRRPHPRPKTTASTGVSESKSAPTELQSLV 1011

  Fly   900 LFPSHS-KWEFVNSSSAQ------GFGHNSNMRKVFNQTLQAWVSEDIDKSENLTLNDIKTRINN 957
            |.|..| ..|.:.|.|..      .|...|..:     |:....::.:|..|.|.|.:.:|.:.:
Mouse  1012 LKPVTSPSLEIIQSQSVSDDLELVAFSTESPQK-----TIAPAETDYVDTKEPLRLEEPRTEVVD 1071

  Fly   958 A----SNIQDISLIFDTLASKLGITP--------SVPNK---FPPFSQNKLKHAPKEEVTRRPIP 1007
            :    |...:.::....|:|:..|.|        ..|.:   .||    |||........:.|:|
Mouse  1072 SLTYVSEPPETTIETSPLSSQSIIIPRPDEPQTEPAPRQTTSMPP----KLKTPHSRMPAKEPVP 1132

  Fly  1008 SST--TTEIPLLIPE------SILPVEREPFIKPMSSFIDDGSSEVLGAAIPVIGEAEVEVVDPL 1064
            ...  ||..|.:.|.      :.:|.:....:||........::.:....||:|     .|:.|.
Mouse  1133 KEPLHTTSKPKMPPSPEVADTTSVPKDERLSLKPDPEVTHSETAPLETRGIPLI-----PVISPR 1192

  Fly  1065 NYEEMLKISQFAASSTEPSVHKLVT--------------------LLPVRSNSGIRTYRPPAADE 1109
            ..:|.|   |.|...|:.|..:|.|                    ..|||.....|.:..||.::
Mouse  1193 PSQEEL---QTAMEETDQSTQELFTTKIPRTTELAKTTQAPHRLHTAPVRPRIPGRPHGRPALNK 1254

  Fly  1110 ETQR------------------SASAPAPLAAPAPAPAPLPGKISIRRKSNLNQSRRFGQPP 1153
            .|.|                  :..||.|   |:|.........:.|:..:::.:||   ||
Mouse  1255 TTTRPDKTKPRGTSHKNGVGTGTKQAPKP---PSPGRNASVDSHATRKPGSVSGTRR---PP 1310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1273NP_647883.1 None
Abi3bpXP_036015888.1 fn3 116..195 CDD:394996
PHA03247 <507..893 CDD:223021 115/561 (20%)
PHA03247 <981..1392 CDD:223021 70/353 (20%)
FN3 1446..1537 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23197
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.