DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11586 and CG1231

DIOPT Version :10

Sequence 1:NP_647881.1 Gene:CG11586 / 38520 FlyBaseID:FBgn0035520 Length:194 Species:Drosophila melanogaster
Sequence 2:NP_612032.1 Gene:CG1231 / 38060 FlyBaseID:FBgn0035134 Length:345 Species:Drosophila melanogaster


Alignment Length:97 Identity:22/97 - (22%)
Similarity:39/97 - (40%) Gaps:29/97 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RKWDKNEYEKLAAERLLNQVAPK-------EEEPVQRENLKRRDYKVDLDSKLGKSVVINKNTPT 67
            ||..::.||..|.:|.::....|       |..||:|                     :.|..||
  Fly   114 RKRARDHYESKAHDRHISAWLAKNYTEVGLEAPPVKR---------------------LAKQGPT 157

  Fly    68 SQSGGYYCNVCDCVVKDSINFLDHINGKKHQR 99
            ..: .::|.:|:..:..|::...|..|:||:|
  Fly   158 GPN-AFHCELCNLDLTSSMHARQHYLGRKHKR 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11586NP_647881.1 ZnF_U1 70..101 CDD:197732 8/30 (27%)
CG1231NP_612032.1 C2H2 Zn finger 104..163 CDD:275371 14/70 (20%)
zf-met 104..126 CDD:463736 4/11 (36%)
zf-met 162..186 CDD:463736 5/23 (22%)
C2H2 Zn finger 164..186 CDD:275371 5/21 (24%)
zf-met 245..268 CDD:463736
ZnF_U1 304..336 CDD:197732
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.