DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KRT5 and ifa-3

DIOPT Version :10

Sequence 1:NP_000415.2 Gene:KRT5 / 3852 HGNCID:6442 Length:590 Species:Homo sapiens
Sequence 2:NP_510649.3 Gene:ifa-3 / 181699 WormBaseID:WBGene00002051 Length:581 Species:Caenorhabditis elegans


Alignment Length:457 Identity:113/457 - (24%)
Similarity:204/457 - (44%) Gaps:102/457 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   150 LTPLNLQIDPSIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVLDTKWTLLQEQGTKTVRQN 214
            |:|.......:|:..|..|:::|..||::.||:|.|||||..||:.|:....:||.:..|:. .:
 Worm    53 LSPYGQGAASTIRDDREREKKEITELNDRLASYIGKVRFLAAQNRKLEADLNVLQSRFGKST-GS 116

Human   215 LEPLFEQYINNLRRQLDSIVGERGR----LDSELRNMQDLVEDFKNKYED--------------- 260
            ::.::|..|..    ..::|.|.|:    .:.|:..::|.:::.:.|:|:               
 Worm   117 VKIMYEMEITT----ATNVVKETGKDHEEAEKEIGKIKDQLDELRKKFEEAQKGRAEDRLKIDEL 177

Human   261 ---------EIN--KRTTA--ENEFVMLKK--------------DVDAAYMNKVELEAKVDALMD 298
                     |||  ||..|  |.|...|||              ::|...:.:::.:.||..:::
 Worm   178 LVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVRSELDQETLLRIDNQNKVTTILE 242

Human   299 EINFMKMFFDAELSQMQTHVS-DTSVVLSMDNNRNL---DLDSIIAEVKAQYEEIANRSRTEAES 359
            ||:|||..|:.||..:|...: ||:     ..||..   :|.:.|.:::|:|:.....:|.:.||
 Worm   243 EIDFMKRGFETELKDLQAQAARDTT-----SENREYFKNELMNSIRDIRAEYDRFMAGNRNDLES 302

Human   360 WYQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLR---AEI----DNVKKQCANLQNAIADA 417
            |.|.:.:|:.....|...::.:.:.|:..::..:..|:   ||:    ..::||..:|...:.|.
 Worm   303 WSQIRVQEINTQTNRQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLEKQLEDLNYQLEDD 367

Human   418 EQRGELALKDARNKLAELEEALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEG--EE-- 478
            ::..|.||.|.       :..::|.:::...||.|.|.|::||..||.|:..||::|||  ||  
 Worm   368 QRSYEAALNDK-------DAQVRKLREECQALLVELQMLLDTKQTLDGELKVYRRMLEGNSEENG 425

Human   479 CRLSGEGV---GPVNISVVTSSVSSGYGSGSGYGGGLGGGLGGGLGGGLAGGSSGSYYSSSSGGV 540
            .|...|.|   ..:|..|.|.::....|..|                     |..||..|:.|.|
 Worm   426 LRQLVEKVVRTSAINEEVDTETMRVVKGEHS---------------------SRTSYQRSAKGNV 469

Human   541 GL 542
            .:
 Worm   470 SI 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KRT5NP_000415.2 Head 1..167 4/16 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Keratin_2_head 16..164 CDD:465068 3/13 (23%)
Filament 167..480 CDD:459643 95/373 (25%)
Coil 1A 168..203 15/34 (44%)
Linker 1 204..222 3/17 (18%)
Coil 1B 223..315 30/137 (22%)
Linker 12 316..338 5/25 (20%)
Coil 2 339..477 38/146 (26%)
Tail 478..590 15/70 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 566..590
ifa-3NP_510649.3 solA <15..>86 CDD:236887 10/32 (31%)
Filament 71..419 CDD:459643 91/364 (25%)
LTD 464..570 CDD:460003 3/8 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.