DRSC/TRiP Functional Genomics Resources

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Protein Alignment KRT5 and ifb-2

DIOPT Version :10

Sequence 1:NP_000415.2 Gene:KRT5 / 3852 HGNCID:6442 Length:590 Species:Homo sapiens
Sequence 2:NP_001293525.1 Gene:ifb-2 / 173973 WormBaseID:WBGene00002054 Length:577 Species:Caenorhabditis elegans


Alignment Length:370 Identity:92/370 - (24%)
Similarity:177/370 - (47%) Gaps:60/370 - (16%)


- Green bases have known domain annotations that are detailed below.


Human   168 EREQIKTLNNKFASFIDKVRFLEQQNKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDS 232
            |:::::.||::...:|.:||.||.:||.|..:...|:......:.| ::..|...:..:||::..
 Worm    39 EKQEMQQLNSRLEVYISRVRQLEDRNKELVIELDTLRGSLGNDIGQ-IKFKFNDSLVKVRREISE 102

Human   233 IVGERGRLDSELR--NMQDLVEDFKNKYED----------------------------------E 261
              ...|.:..|::  .::|.:.|::::||:                                  :
 Worm   103 --AHSGTIGVEVKVDRLRDDLNDYRHRYEEARREVEREKTTWGGAISQAQAELDTNKSRYAAILD 165

Human   262 INKRTTAENEFVML-----KKDVDAAYMNKVELEAKVDALMDEINFMKMFFDAELSQMQTHVSDT 321
            ..||..||.:.:.|     |.::|||.:::..|:|:.|.|..|:.|:......|:::::|.::..
 Worm   166 EEKRLYAEQDQLYLQLAAAKDELDAAIVDRRRLQAEEDDLKIELEFLGRIHSQEITELRTLLAQA 230

Human   322 SVVLSMDNNRNL---DLDSIIAEVKAQYEEIANRSRTEAESWYQTKYEELQQTAGRHGDDLRNTK 383
            ..     :.|..   :|...|.|:||:|::|...:|.:.|:.:|:|...::.:.....:.....:
 Worm   231 PA-----DTREFFKNELALAIREIKAEYDKIIQTTRVDLETIFQSKISAVESSIVSKNEAAVFRQ 290

Human   384 HEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAE-QRGELALKDAR---NKLAELEEALQKAKQ 444
            .||.:||..|..|||::..::.:.:.|:......: |.||    |.|   ::|.:.:.||:..::
 Worm   291 EEIRKMNESITTLRAKLSELEARNSALEREANTLQIQLGE----DQRAYESELHKRDNALRFMRE 351

Human   445 DMARLLREYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVGPV 489
            |...|:.|.|.|:|||..||.|||.||||:|.||.|.:..|.|.|
 Worm   352 DCQTLIAELQALLNTKQTLDTEIAIYRKLVESEEGRFTHVGQGVV 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KRT5NP_000415.2 Head 1..167
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Keratin_2_head 16..164 CDD:465068
Filament 167..480 CDD:459643 88/359 (25%)
Coil 1A 168..203 11/34 (32%)
Linker 1 204..222 2/17 (12%)
Coil 1B 223..315 24/132 (18%)
Linker 12 316..338 3/24 (13%)
Coil 2 339..477 45/141 (32%)
Tail 478..590 5/12 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 566..590
ifb-2NP_001293525.1 Filament 39..387 CDD:459643 88/359 (25%)
LTD 461..568 CDD:460003
Blue background indicates that the domain is not in the aligned region.

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