DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1265 and mpdu1b

DIOPT Version :9

Sequence 1:NP_647878.1 Gene:CG1265 / 38517 FlyBaseID:FBgn0035517 Length:221 Species:Drosophila melanogaster
Sequence 2:NP_001002130.1 Gene:mpdu1b / 415220 ZFINID:ZDB-GENE-040625-135 Length:255 Species:Danio rerio


Alignment Length:224 Identity:53/224 - (23%)
Similarity:103/224 - (45%) Gaps:36/224 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LVVADLLSLITVSSCLVIKVPQINTIRANESSKGISVLGLCLELFSYTVMLSYNYTSGYDFLSYM 83
            :|::..|.:..:...:::|:|||..:...:|::|:|...:.||||:.|..::|:..:.:.|.|:.
Zfish    47 IVISKGLGIGIILGSVLVKLPQILKLLGAKSAEGLSFNSVLLELFAITGTMAYSLANSFPFSSWG 111

  Fly    84 EYPVLLLQEYALIYYAFKYQDLLGRRTQVVAILYSIVATLIYMKLFPIIILKFLVPFCTPIG--A 146
            |...|:.|...:   .|..|...|:..:.:..|      ::|..|..::    |.| .||:.  .
Zfish   112 EALFLMFQTVTI---GFLIQHYGGKTIKGLGFL------VVYFGLLAVL----LSP-VTPLSVVT 162

  Fly   147 TSKVLQLLAIL--RTKDASSVSRT--TWALSAFT-------NMTRIYTVFFQSHDWMLLSNFLIS 200
            |.:...:.||:  |...|.:..|.  |..|||.:       ::.||:|...::.|.::...::||
Zfish   163 TMQASNMPAIIFGRLIQAGTNYRNGHTGQLSAISVFLLFAGSLARIFTTVQETGDSLMAVTYIIS 227

  Fly   201 TFLSASVFTAACVY--------KKKAKAE 221
            :..: .|..|..:|        |||.|.:
Zfish   228 SCCN-GVIAAQVLYYWNSSPALKKKKKTQ 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1265NP_647878.1 PQ-loop 22..80 CDD:282099 14/57 (25%)
mpdu1bNP_001002130.1 2A43 47..242 CDD:130026 49/209 (23%)
PQ-loop 50..108 CDD:282099 14/57 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3211
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1059579at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.