| Sequence 1: | NP_523922.1 | Gene: | ago / 38516 | FlyBaseID: | FBgn0041171 | Length: | 1326 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006245229.1 | Gene: | Aamp / 301512 | RGDID: | 1306281 | Length: | 436 | Species: | Rattus norvegicus |
| Alignment Length: | 323 | Identity: | 89/323 - (27%) |
|---|---|---|---|
| Similarity: | 143/323 - (44%) | Gaps: | 66/323 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 992 GHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGN-------- 1046
Fly 1047 ---IIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHL--HGSKVVSGSRDATLRVWDIEQGS 1106
Fly 1107 CLHVL---VGHLAAVRCV--QYDGKLIVSGAYDYMVK-----------IWHPERQECLHTL---- 1151
Fly 1152 QGHTNRVYSLQFDGLHVVS--GSLDTSIRVWDVETGNCKHTLMGHQSLTSGM-----ELRQNILV 1209
Fly 1210 SGNADSTVKVWDITTGQCLQTLSGPNKHHSAVT---CLQFNSRFVVTSSDDGTVKLWDVKTGD 1269 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| ago | NP_523922.1 | F-box-like | 892..938 | CDD:289689 | |
| WD40 | <981..1274 | CDD:225201 | 89/323 (28%) | ||
| WD40 | 988..1264 | CDD:238121 | 87/316 (28%) | ||
| WD40 repeat | 998..1033 | CDD:293791 | 9/36 (25%) | ||
| WD40 repeat | 1039..1073 | CDD:293791 | 9/44 (20%) | ||
| WD40 repeat | 1078..1112 | CDD:293791 | 14/38 (37%) | ||
| WD40 repeat | 1119..1152 | CDD:293791 | 12/49 (24%) | ||
| WD40 repeat | 1158..1192 | CDD:293791 | 10/35 (29%) | ||
| WD40 repeat | 1200..1232 | CDD:293791 | 9/36 (25%) | ||
| WD40 repeat | 1241..1263 | CDD:293791 | 7/24 (29%) | ||
| Aamp | XP_006245229.1 | WD40 | 88..388 | CDD:238121 | 72/270 (27%) |
| WD40 repeat | 97..134 | CDD:293791 | 89/323 (28%) | ||
| WD40 repeat | 139..177 | CDD:293791 | 14/49 (29%) | ||
| WD40 repeat | 178..215 | CDD:293791 | 6/37 (16%) | ||
| WD40 repeat | 220..256 | CDD:293791 | 13/35 (37%) | ||
| WD40 repeat | 266..302 | CDD:293791 | 9/35 (26%) | ||
| WD40 repeat | 309..354 | CDD:293791 | 11/44 (25%) | ||
| WD40 repeat | 363..399 | CDD:293791 | 8/35 (23%) | ||
| WD40 | 391..429 | CDD:197651 | 13/41 (32%) | ||
| WD40 repeat | 405..429 | CDD:293791 | 7/23 (30%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.000 | |||||