DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ago and FBXO24

DIOPT Version :9

Sequence 1:NP_523922.1 Gene:ago / 38516 FlyBaseID:FBgn0041171 Length:1326 Species:Drosophila melanogaster
Sequence 2:NP_036304.2 Gene:FBXO24 / 26261 HGNCID:13595 Length:618 Species:Homo sapiens


Alignment Length:425 Identity:79/425 - (18%)
Similarity:127/425 - (29%) Gaps:170/425 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   892 ISLLPRELALFVLSYLEPKDLLRAAQTCRSWRFLCDDNLLWKEKCRKAQILAEPRSDRPKRGRDG 956
            |.|.|.||...::|:|..:||:...||||.:..:||...:|:..||:    ..||......|   
Human    77 IQLFPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRICRR----LSPRLQDQGSG--- 134

  Fly   957 NMPPIASPWKAAYMRQHIIEMNW-----RSRPVRK---PKVLKGH------DDHV-----ITCLQ 1002
                 ..|||.|.:..:...:.:     |.|.:.|   |.:..|:      .|||     :..|.
Human   135 -----VRPWKRAAILNYTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRFLPTKDHVFILDYVGTLF 194

  Fly  1003 FSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNIIISGSTDRTLKVWDMDSGAC 1067
            |..|.:||     ||....                 |.......::..|:.|             
Human   195 FLKNALVS-----TLGQMQ-----------------WKRACRYVVLCRGAKD------------- 224

  Fly  1068 VHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCLHVL--------VGHLAAVRCVQYD 1124
                  ..|..||             |...|.:       |:||        ||..::..|    
Human   225 ------FASDPRC-------------DTVYRKY-------LYVLATREPQEVVGTTSSRAC---- 259

  Fly  1125 GKLIVSGAYDYMVKIWHPERQECLHT-LQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCK 1188
                                 :|:.. ||....||:.:.|                        .
Human   260 ---------------------DCVEVYLQSSGQRVFKMTF------------------------H 279

  Fly  1189 HTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKH--------------HS 1239
            |::...|.:..|.|.::.:|:   .....|::.:...:  ..|..|..:              |.
Human   280 HSMTFKQIVLVGQETQRALLL---LTEEGKIYSLVVNE--TQLDQPRSYTVQLALRKVSHYLPHL 339

  Fly  1240 AVTCLQFNSRFVVTSSDDGTVKLWDVKTGDFIRNL 1274
            .|.|:..|....:..:|.|.| .::|.|....|:|
Human   340 RVACMTSNQSSTLYVTDQGGV-YFEVHTPGVYRDL 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
agoNP_523922.1 F-box-like 892..938 CDD:289689 17/45 (38%)
WD40 <981..1274 CDD:225201 52/329 (16%)
WD40 988..1264 CDD:238121 46/309 (15%)
WD40 repeat 998..1033 CDD:293791 7/34 (21%)
WD40 repeat 1039..1073 CDD:293791 3/33 (9%)
WD40 repeat 1078..1112 CDD:293791 7/41 (17%)
WD40 repeat 1119..1152 CDD:293791 2/33 (6%)
WD40 repeat 1158..1192 CDD:293791 3/33 (9%)
WD40 repeat 1200..1232 CDD:293791 4/31 (13%)
WD40 repeat 1241..1263 CDD:293791 6/21 (29%)
FBXO24NP_036304.2 F-box-like 81..123 CDD:289689 15/41 (37%)
RCC1 414..460 CDD:278826
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0274
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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