DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ago and FBXO24

DIOPT Version :10

Sequence 1:NP_523922.1 Gene:ago / 38516 FlyBaseID:FBgn0041171 Length:1326 Species:Drosophila melanogaster
Sequence 2:NP_036304.2 Gene:FBXO24 / 26261 HGNCID:13595 Length:618 Species:Homo sapiens


Alignment Length:425 Identity:79/425 - (18%)
Similarity:127/425 - (29%) Gaps:170/425 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   892 ISLLPRELALFVLSYLEPKDLLRAAQTCRSWRFLCDDNLLWKEKCRKAQILAEPRSDRPKRGRDG 956
            |.|.|.||...::|:|..:||:...||||.:..:||...:|:..||:    ..||......|   
Human    77 IQLFPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRICRR----LSPRLQDQGSG--- 134

  Fly   957 NMPPIASPWKAAYMRQHIIEMNW-----RSRPVRK---PKVLKGH------DDHV-----ITCLQ 1002
                 ..|||.|.:..:...:.:     |.|.:.|   |.:..|:      .|||     :..|.
Human   135 -----VRPWKRAAILNYTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRFLPTKDHVFILDYVGTLF 194

  Fly  1003 FSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNIIISGSTDRTLKVWDMDSGAC 1067
            |..|.:||     ||....                 |.......::..|:.|             
Human   195 FLKNALVS-----TLGQMQ-----------------WKRACRYVVLCRGAKD------------- 224

  Fly  1068 VHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCLHVL--------VGHLAAVRCVQYD 1124
                  ..|..||             |...|.:       |:||        ||..::..|    
Human   225 ------FASDPRC-------------DTVYRKY-------LYVLATREPQEVVGTTSSRAC---- 259

  Fly  1125 GKLIVSGAYDYMVKIWHPERQECLHT-LQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCK 1188
                                 :|:.. ||....||:.:.|                        .
Human   260 ---------------------DCVEVYLQSSGQRVFKMTF------------------------H 279

  Fly  1189 HTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKH--------------HS 1239
            |::...|.:..|.|.::.:|:   .....|::.:...:  ..|..|..:              |.
Human   280 HSMTFKQIVLVGQETQRALLL---LTEEGKIYSLVVNE--TQLDQPRSYTVQLALRKVSHYLPHL 339

  Fly  1240 AVTCLQFNSRFVVTSSDDGTVKLWDVKTGDFIRNL 1274
            .|.|:..|....:..:|.|.| .::|.|....|:|
Human   340 RVACMTSNQSSTLYVTDQGGV-YFEVHTPGVYRDL 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
agoNP_523922.1 F-box_FBXW7 875..933 CDD:438905 15/40 (38%)
WD40 <979..1267 CDD:441893 51/329 (16%)
WD40 repeat 998..1033 CDD:293791 7/34 (21%)
WD40 repeat 1039..1073 CDD:293791 3/33 (9%)
WD40 repeat 1078..1112 CDD:293791 7/41 (17%)
WD40 repeat 1119..1152 CDD:293791 2/33 (6%)
WD40 repeat 1158..1192 CDD:293791 3/33 (9%)
WD40 repeat 1200..1232 CDD:293791 4/31 (13%)
WD40 repeat 1241..1263 CDD:293791 6/21 (29%)
FBXO24NP_036304.2 F-box_FBXO24 76..122 CDD:438870 16/44 (36%)
ATS1 <401..>463 CDD:444065
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.