Sequence 1: | NP_523922.1 | Gene: | ago / 38516 | FlyBaseID: | FBgn0041171 | Length: | 1326 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001300561.1 | Gene: | lin-23 / 174058 | WormBaseID: | WBGene00003009 | Length: | 667 | Species: | Caenorhabditis elegans |
Alignment Length: | 553 | Identity: | 161/553 - (29%) |
---|---|---|---|
Similarity: | 238/553 - (43%) | Gaps: | 115/553 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 800 SSQHLGPT----AVLSVTPSSHLTSSTPGSALGRRTPRSVPSRDNPPPELQHWLAQFQRWSHVER 860
Fly 861 LLALDRLIDHCDPSQVRHMMKVIEPQFQRDFISLLPRELALFVLSYLEPKDLLRAAQTCRSWRFL 925
Fly 926 C-----------------DDNLLW--KEK------------------CRKAQILAEPRSDR---- 949
Fly 950 -----------PKRGRDGNMPPIASPWKAAYMRQHIIEMNWRSRPVRKPKV-LKGHDDHVITCLQ 1002
Fly 1003 FSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNIIISGSTDRTLKVWDMDSGAC 1067
Fly 1068 VHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDI---EQGSCLHVLVGHLAAVRCVQYDGKLIV 1129
Fly 1130 SGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGH 1194
Fly 1195 QSLTSGMELRQNILVSGNADSTVKVWD---------ITTGQCLQTLSGPNKHHSAVTCLQFNSRF 1250
Fly 1251 VVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSG 1283 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ago | NP_523922.1 | F-box-like | 892..938 | CDD:289689 | 17/82 (21%) |
WD40 | <981..1274 | CDD:225201 | 106/305 (35%) | ||
WD40 | 988..1264 | CDD:238121 | 104/288 (36%) | ||
WD40 repeat | 998..1033 | CDD:293791 | 15/34 (44%) | ||
WD40 repeat | 1039..1073 | CDD:293791 | 15/33 (45%) | ||
WD40 repeat | 1078..1112 | CDD:293791 | 8/36 (22%) | ||
WD40 repeat | 1119..1152 | CDD:293791 | 10/32 (31%) | ||
WD40 repeat | 1158..1192 | CDD:293791 | 15/33 (45%) | ||
WD40 repeat | 1200..1232 | CDD:293791 | 10/40 (25%) | ||
WD40 repeat | 1241..1263 | CDD:293791 | 9/21 (43%) | ||
lin-23 | NP_001300561.1 | Beta-TrCP_D | 41..80 | CDD:198096 | 9/42 (21%) |
WD40 | 168..515 | CDD:225201 | 119/371 (32%) | ||
WD40 | 222..500 | CDD:238121 | 104/280 (37%) | ||
WD40 repeat | 225..260 | CDD:293791 | 15/34 (44%) | ||
WD40 repeat | 266..300 | CDD:293791 | 15/33 (45%) | ||
WD40 repeat | 305..342 | CDD:293791 | 8/36 (22%) | ||
WD40 repeat | 349..382 | CDD:293791 | 10/32 (31%) | ||
WD40 repeat | 388..422 | CDD:293791 | 15/33 (45%) | ||
WD40 repeat | 428..471 | CDD:293791 | 10/42 (24%) | ||
WD40 repeat | 477..499 | CDD:293791 | 9/21 (43%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D150270at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R947 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |