DRSC/TRiP Functional Genomics Resources

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Protein Alignment pav and KIF20B

DIOPT Version :9

Sequence 1:NP_477025.1 Gene:pav / 38515 FlyBaseID:FBgn0011692 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_001271188.1 Gene:KIF20B / 9585 HGNCID:7212 Length:1820 Species:Homo sapiens


Alignment Length:1062 Identity:262/1062 - (24%)
Similarity:444/1062 - (41%) Gaps:290/1062 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SDKARDPVNVFCRVRPL-QSDADLTS---LRVKNSTTIALNPQDQLLQHHKPHNGAQREVQYIFK 90
            |.:::|.:.|..|:||. ||:.:|.|   :.:.:|.|:.|.....:|......:..|...::.|.
Human    52 SFESKDYLQVCLRIRPFTQSEKELESEGCVHILDSQTVVLKEPQCILGRLSEKSSGQMAQKFSFS 116

  Fly    91 HVFQPDATQQDVY-AAVAQPLVENLLKGRNSLLFTYGVTGSGKTYTMTGNLRHRGIMPRCLDVLF 154
            .||.|..||::.: ..:.|| |::||||::.|:||||:|.||||||..|...:.||:||.|:|||
Human   117 KVFGPATTQKEFFQGCIMQP-VKDLLKGQSRLIFTYGLTNSGKTYTFQGTEENIGILPRTLNVLF 180

  Fly   155 RTISDYQAKKFVFKPDKLNGFEILSEE---------DALLERQHEMNQRFAGSGRFAFRHKDSDP 210
            .::.:....|...||.:...:..||.|         .|||.:..|:..           |.|||.
Human   181 DSLQERLYTKMNLKPHRSREYLRLSSEQEKEEIASKSALLRQIKEVTV-----------HNDSDD 234

  Fly   211 EIAS-----------QASVEPIPLLGLDEDN--MYSVFVTYIEIYNNSVYDLL--EDSGIQKTLQ 260
            .:..           :.|::......|:..|  .:||:|::.||||..:|||.  ..|..||   
Human   235 TLYGSLTNSLNISEFEESIKDYEQANLNMANSIKFSVWVSFFEIYNEYIYDLFVPVSSKFQK--- 296

  Fly   261 SKIIR--EDANRHMFVHGVTEVEVKTVEDALEVFQMGQKRKRMGHTVLNAESSRSHSVFNIRLVQ 323
            .|::|  :|...:.|:..:..::|...::|..:.::|.|.:.:..|.||..||||||:|.::::|
Human   297 RKMLRLSQDVKGYSFIKDLQWIQVSDSKEAYRLLKLGIKHQSVAFTKLNNASSRSHSIFTVKILQ 361

  Fly   324 APTDSQGENVVQDRQNITVSQLSLVDLAGSERSSRTKNTGVRLREAGNINNSLMTLRTCLEYLRE 388
            . .||:...|::      ||:|||.|||||||:.:|:|.|.||||.||||.||:||..|:..|:.
Human   362 I-EDSEMSRVIR------VSELSLCDLAGSERTMKTQNEGERLRETGNINTSLLTLGKCINVLKN 419

  Fly   389 NQLAASNGLAPKKVPYRDSKITHMFKNYFDGEGQVSMIVCINPRIEDYDENMQVMKFAEMTQEV- 452
            ::.:...    :.||:|:||:||.|:::|:|:|::.|||.|:.....|||.:.|:||:.:.|:| 
Human   420 SEKSKFQ----QHVPFRESKLTHYFQSFFNGKGKICMIVNISQCYLAYDETLNVLKFSAIAQKVC 480

  Fly   453 ---------------------------------QIARAT-------------------------- 458
                                             .:.|||                          
Human   481 VPDTLNSSQEKLFGPVKSSQDVSLDSNSNSKILNVKRATISWENSLEDLMEDEDLVEELENAEET 545

  Fly   459 ------PMKQDLGLTPGRRKA-------NKLFKIAVNNLNELGIPEAKD-LEVDVGLVYSLGPDF 509
                  .:.:||..|....||       .||..: :.:|.:..|.|.|: |.::..:...:..:|
Human   546 QNVETKLLDEDLDKTLEENKAFISHEEKRKLLDL-IEDLKKKLINEKKEKLTLEFKIREEVTQEF 609

  Fly   510 PAY----EMDSPEAQIKIRELMHYLEQRIEKRKKLRANLDIKCDS-------------------- 550
            ..|    |.|..|..::.||:   ||:..|:|..:..:|..|||:                    
Human   610 TQYWAQREADFKETLLQEREI---LEENAERRLAIFKDLVGKCDTREEAAKDICATKVETEETHN 671

  Fly   551 ---FRQMLMNLDRDNL--------------------------------QLRTELASLKA------ 574
               |..::.:| :||:                                |::.|||..|.      
Human   672 YVGFEDIIDSL-QDNVADIKKQAEIAHLYIASLPDPQEATACLELKFNQIKAELAKTKGELIKTK 735

  Fly   575 --VYKQERDRSAALE------KKVRIHESSIDVLNNTLSKQERQIEEL---------TFKLNEK- 621
              :.|:|.:..:.::      ||:......|..|.|.:.::|..|.|.         |||.|:| 
Human   736 EELKKRENESDSLIQELETSNKKIITQNQRIKELINIIDQKEDTINEFQNLKSHMENTFKCNDKA 800

  Fly   622 --------ENMLTQKEHEKEKQKKKFSSKLAVESDKNKREFELKLREQRVK---------LQERM 669
                    ..::..:..|..|..|   ||:..|. |...|.||:..|...|         :.|..
Human   801 DTSSLIINNKLICNETVEVPKDSK---SKICSER-KRVNENELQQDEPPAKKGSIHVSSAITEDQ 861

  Fly   670 RIKDEKLRLVSNILQSEDLPSLPRSQSS--------ENIL-NEKDRGAYTAR-----------TE 714
            : |.|::|  .||.:.||:..|..:...        ||.| |||:..|...:           :|
Human   862 K-KSEEVR--PNIAEIEDIRVLQENNEGLRAFLLTIENELKNEKEEKAELNKQIVHFQQELSLSE 923

  Fly   715 ESSVPATRTDIYATPRHGAAAANNRHRRSRSAGDKWLEHRAANPVPLGT------IMQPYLKNRK 773
            :.::..::........:..|.|....::|::...:....:.:|.:...|      :.|..|.:  
Human   924 KKNLTLSKEVQQIQSNYDIAIAELHVQKSKNQEQEEKIMKLSNEIETATRSITNNVSQIKLMH-- 986

  Fly   774 SVTKLTDLKELTAHGTTKYCLVSQDADTD----GDVETKLYKGNVIPTCGGGAQVVFNDVECLKQ 834
              ||:.:|:.|.:        |||.::.|    .|:.....:.|:..|   ...::.||....||
Human   987 --TKIDELRTLDS--------VSQISNIDLLNLRDLSNGSEEDNLPNT---QLDLLGNDYLVSKQ 1038

  Fly   835 --KSPVHSPTRKRPSNGNISAL 854
              :..:..|.|:...:.:|.|:
Human  1039 VKEYRIQEPNRENSFHSSIEAI 1060

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pavNP_477025.1 KISc_KIF23_like 35..450 CDD:276819 150/445 (34%)
Kinesin 42..452 CDD:278646 149/440 (34%)
MKLP1_Arf_bdg 735..837 CDD:293148 21/113 (19%)
KIF20BNP_001271188.1 KISc_KIF23_like 57..477 CDD:276819 150/445 (34%)
Kinesin 64..479 CDD:278646 149/440 (34%)
Smc 629..1455 CDD:224117 88/458 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 829..866 9/38 (24%)
Necessary and sufficient for interaction with SHTN1. /evidence=ECO:0000250|UniProtKB:Q80WE4 1050..1107 2/11 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1247..1275
DUF342 <1268..1357 CDD:302792
Interaction with PIN1. /evidence=ECO:0000269|PubMed:11470801 1560..1820
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1760..1781
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0247
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D314538at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R641
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.850

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