DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pav and Klp98A

DIOPT Version :9

Sequence 1:NP_477025.1 Gene:pav / 38515 FlyBaseID:FBgn0011692 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_524532.2 Gene:Klp98A / 43310 FlyBaseID:FBgn0004387 Length:1265 Species:Drosophila melanogaster


Alignment Length:1087 Identity:235/1087 - (21%)
Similarity:395/1087 - (36%) Gaps:382/1087 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VNVFCRVRPLQS-----DADLTSLRVKNSTTIALNPQDQLLQ------HHKPHNGAQREVQYIFK 90
            :.|..||||..|     ||.|. :.::|..|..|.|:.|.::      ||          .:.|.
  Fly     4 LKVAVRVRPFNSREIDMDAQLI-MEMENKKTRLLKPRLQSIRDAGRDNHH----------DFTFD 57

  Fly    91 HVF------QPD-ATQQDVYAAVAQPLVENLLKGRNSLLFTYGVTGSGKTYTMTGNLRHRGIMPR 148
            :.:      .|. |||:.||:.:...:|:...:|.|:.:|.||.||||||:||.|...:.|::||
  Fly    58 YSYWSFDAEDPHFATQEQVYSDLGNDVVDCAYEGYNACVFAYGQTGSGKTFTMMGTPNNPGLIPR 122

  Fly   149 CLDVLFRTISDYQAKKFVFKPDKLNGFEILSEEDALLERQHEMNQRFAGSGRFAFRHKDSDPEIA 213
            ..:.||..:.                                                       
  Fly   123 ICEELFARMR------------------------------------------------------- 132

  Fly   214 SQASVEPIPLLGLDEDNMYSVFVTYIEIYNNSVYDLLEDSGIQKTLQSKIIREDANRHMFVHGVT 278
                      :|.:....|....:|:||||..|.|||   ..|.|.....:||..:...:|..::
  Fly   133 ----------VGQESGTGYRTHASYLEIYNERVKDLL---AAQSTGHGLRVREHRSLGPYVENLS 184

  Fly   279 EVEVKTVEDALEVFQMGQKRKRMGHTVLNAESSRSHSVFNIRLVQAPTDSQGENVVQDRQNITVS 343
            :..|...::..|....|..::....|.:|..|||||::|.|..|||.       .:.|..:.|||
  Fly   185 QHAVSDFDEIQECIARGNAQRTTASTNMNDTSSRSHAIFTITFVQAV-------FMNDMPSETVS 242

  Fly   344 QLSLVDLAGSERSSRTKNTGVRLREAGNINNSLMTLRTCLEYLRE----------NQLAASNGLA 398
            ::.|||||||||::.|..||.||:|..:||.||:||.:.:..|.|          :.||.:...|
  Fly   243 KIHLVDLAGSERANATGATGQRLKEGAHINKSLVTLGSVISALAEQTGGGHNSSSSALATTPNGA 307

  Fly   399 PKKV---PYRDSKITHMFKNYFDGEGQVSMIVCINPRIEDYDENMQVMKFAEMTQEVQIARATPM 460
            .|:|   |||||.:|.:.|:...|..:..||..::|...:|.|.:..:::|...:.: |.:.| :
  Fly   308 SKRVLYIPYRDSILTWLLKDSLGGNSKTIMIAALSPADCNYSETLSTLRYANRAKNI-INKPT-V 370

  Fly   461 KQDLG---LTPGRRKANKL--------------------------------------FKIAVNNL 484
            .:|..   :...|.:.|||                                      :|:|.:.|
  Fly   371 NEDTNVKLIRELREEINKLKSMLAGDIHSLQPSLKVLADLQKKEAQEKVLTEEWTEKWKVAQSIL 435

  Fly   485 NE---LGIPE--------------------------------------------AKDLEVD---- 498
            .|   ||:.:                                            |:|:|:.    
  Fly   436 QEQKSLGLRKSGVGVVLDSEMPHLIGIHNDVTTGVTLYSLKEGETRIGSEDADVAQDIELAGDGI 500

  Fly   499 ---------VGLVYSLGPDFP-------AYEMDSPEAQIKIRELM----------HYLEQRIEKR 537
                     .|.|.:|.| :|       |:.:|.|: ||...:::          :...:..:.|
  Fly   501 RAQHCSIFLKGGVVTLHP-WPLAQCWVNAHLIDEPK-QISQGDIILLGRTNIFRFNNPAEAAKLR 563

  Fly   538 KKL-RANLD--------------IKC---------------------------------DSFRQM 554
            |.| |:.||              :.|                                 |..|::
  Fly   564 KDLSRSQLDMSRLSLITSSKENLLTCSIYSDEDGASPYKRPERQYYPQRPMSRDDPELQDENRKI 628

  Fly   555 LMNLDRDNLQLRTELASLKAVYKQERDRSAALEKKVRIHESSIDVLNNTLSKQERQIEELTFKLN 619
            |..::....||..|...:...||.:..:  ..|:.:|:.:..:|.| ..|:.:|:::      :.
  Fly   629 LDTIENALKQLNVERVQMHDQYKTKVRK--LTEELIRLEQEEMDGL-QLLNCREQEL------IA 684

  Fly   620 EKENMLTQKEHEKE------KQKKKFSSKLAVESDKNKREF---------EL----KLREQRVKL 665
            .|:.:|.:|.:||.      :|...|.::|    |..||:|         ||    ||.|..:|:
  Fly   685 RKDMLLWEKNNEKVQIDIVCRQISAFQTQL----DSKKRDFSEYVAKELQELQDCGKLDEMGMKI 745

  Fly   666 QERMRIKDEKLRLVSNIL--------------QSEDLPSLPRSQSSENILNEKDRGAYTARTEES 716
            :|...:.||.|..||:.|              .:|::..|      :..:.||:|....:.|:.:
  Fly   746 EEGTPLNDELLLQVSDSLDLFAAQFIKDTVRRNNEEIRKL------DEQIAEKERILNASTTKIA 804

  Fly   717 SVPATRTDIYATPRHGAAAANNRHRRSRSAGDKWLEHRAANPVPLGTIMQPYLKNRKSVTKLTDL 781
            .|..|..:|        .|...|.|..|:..:  .|.:|.........:|...|:..:.|...:.
  Fly   805 KVDETMLEI--------QAQLERLRLERAESE--AESQAMRAKKQNMKLQLGNKSMSTSTSTNEA 859

  Fly   782 KELTAHGTTKYCLVSQDADTDGDVETKLYKGNVI--PTCGGGAQVVFNDVECLKQKSPVHSPTRK 844
            .:::...|.:.|      ||....::.|   :::  ||...|.|...::..|..:...  ..|||
  Fly   860 DDVSKSDTYETC------DTFHTAQSNL---SLVSSPTITEGQQSPLSNCSCDAEDEA--EDTRK 913

  Fly   845 ----------------RPSNGNIS---ALGG-GAVPSTVTSAQDVAS 871
                            .||:|:.|   .:|| |:.||...|:|.:.|
  Fly   914 DDLSGSSEETSRTCTAGPSSGSGSGSVGIGGSGSAPSCTPSSQAIMS 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pavNP_477025.1 KISc_KIF23_like 35..450 CDD:276819 120/443 (27%)
Kinesin 42..452 CDD:278646 119/440 (27%)
MKLP1_Arf_bdg 735..837 CDD:293148 19/103 (18%)
Klp98ANP_524532.2 KISc_KIF1A_KIF1B 2..371 CDD:276816 122/454 (27%)
KISc 3..371 CDD:214526 122/454 (27%)
Kinesin_assoc 370..478 CDD:292801 11/107 (10%)
FHA 456..555 CDD:238017 13/100 (13%)
PX_KIF16B_SNX23 1131..1259 CDD:132784
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437730
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.