DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pav and Kif19A

DIOPT Version :9

Sequence 1:NP_477025.1 Gene:pav / 38515 FlyBaseID:FBgn0011692 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_996208.1 Gene:Kif19A / 41717 FlyBaseID:FBgn0038205 Length:750 Species:Drosophila melanogaster


Alignment Length:820 Identity:195/820 - (23%)
Similarity:327/820 - (39%) Gaps:209/820 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RPLQSDADLTSLRVKNS-----TTIALNPQDQLLQHHKPHNGAQREVQYIFKHVFQPDATQQDVY 103
            :|.|.:..:.::||:.|     ..|.:.....||.   ...|..|..||.:.|||:.:.:|:.||
  Fly    29 QPAQEERLVVAVRVRPSMEATERCIEVISGGSLLY---DDGGKSRPRQYSYDHVFRENDSQEQVY 90

  Fly   104 AAVAQPLVENLLKGRNSLLFTYGVTGSGKTYTMTGNLRHRGIMPRCLDVLFRTISDYQAKKFVFK 168
            .....|||.::|.|.|:.:|.||.||||||:||.|.:..:  .|:..|....|.|          
  Fly    91 KTTTAPLVRDVLNGLNAAVFAYGATGSGKTHTMLGPVPRK--KPQTSDRAPPTAS---------- 143

  Fly   169 PDKLNGFEILSEEDALLERQHEMNQRFAGSGRFAFRHKDSDPEIASQASVEPIPLLGLDEDNMYS 233
               .:..::.|::..|:.|..|          ..|.|.:|....:.:.|                
  Fly   144 ---CDSTDVSSQDIGLMVRAIE----------DIFSHIESAEAYSCRVS---------------- 179

  Fly   234 VFVTYIEIYNNSVYDLLEDSGIQKTLQSKIIRED-ANRHMFVHGVTEVEVKTVEDALEVFQMGQK 297
              ::|:||||..:.|||...|..:      :||| ..:.:.|.|::|:...:.::.:.:...|.|
  Fly   180 --ISYLEIYNELIRDLLNPGGPLE------LREDHRGQRITVAGLSEITTSSRKEVVSLLLKGNK 236

  Fly   298 RKRMGHTVLNAESSRSHSVFNIRLVQAPT---DSQGENVVQDRQNITVSQLSLVDLAGSERSSRT 359
            .:.|..|..|..|||||::.:| :|||.|   ..||             :|.|.|||||||:.:|
  Fly   237 ARTMEPTAANQTSSRSHALLSI-MVQARTPLGTKQG-------------RLFLTDLAGSERAKKT 287

  Fly   360 KNTGVRLREAGNINNSLMTLRTCLEYLRENQLAASNGLA--PKKVPYRDSKITHMFKNYFDGEGQ 422
            ||.|.||:|..:||.||:.|...:           |||:  .:.|.|||||:|.:.|....|..:
  Fly   288 KNRGKRLQEGAHINRSLLALGNVI-----------NGLSGGARYVNYRDSKLTRLLKEALSGRCK 341

  Fly   423 VSMIVCINPRIEDYDENMQVMKFAEMTQEVQIARATPMKQDLGLTPGRRKANKLFKIAVNNLNE- 486
            ..||..:.|..:..||....:.:|:....:    .|.::..:.:...:....|.::..|:.|.: 
  Fly   342 TVMIAHVAPESKHRDETKNTLVYADRANSI----TTKLQNSVYIDEFKDFPTKHYQSLVSELRDE 402

  Fly   487 --------------LGIPEAKDLEVDVGLVYSLGPDFPAYEMDSPEAQIKIRELMHYLEQRIE-- 535
                          .|...|.......|...:.|....:..:...:.|.|..  :.||.::|.  
  Fly   403 VSRLRTKMLTERPRSGAAAAAAAAAASGSAGTAGSGAGSEAVQEQDEQRKTE--LRYLREQIVLT 465

  Fly   536 -------KRKKLRAN---LDIKCDSFRQ-MLMN------------LDRDNLQLRTELASLKAVYK 577
                   :||.|.|.   |.::.|:.|| |:::            :..|:::....:| ||..:.
  Fly   466 FKQQMKLRRKLLEAESHLLGLELDAERQHMIISHWQGRIGKLYDAMGDDDIESEGSVA-LKNAWG 529

  Fly   578 QERDRSAALEKKVR----IHESSIDVLNNTLSKQERQIEELTFKLNEKEN----MLTQKEHEKEK 634
            :    .||:||:.|    |.|.:...|.....|..:..:||..:::..|.    .|..:.||.| 
  Fly   530 E----LAAIEKETRRYKEIRERTEHELEQCRQKGVKLEDELPERISSDEERELLALLCRVHELE- 589

  Fly   635 QKKKFSSKLAVESDKNKREFELKLREQRVKLQERMRIKDEKLRLVSNILQSE---------DLPS 690
                 :.|:::::::..|:.||:.|:.::...||.|      ||..:|:.|:         |||.
  Fly   590 -----ADKVSLQAERLARQAELRRRDLQLLRAERQR------RLCEDIISSQRRLIEEGNVDLPD 643

  Fly   691 LPRS-----QSSENILNEKDRGAYTARTE--ESSVPATRTDIYATPRHGAAAANNRHRRSRSAGD 748
            ..|.     |      .|...|..|..|.  |..:|...|....:|             ..|:..
  Fly   644 ELRELYGLYQ------QEIHAGVVTPSTSNYERKLPPIYTAGSDSP-------------GSSSSS 689

  Fly   749 KWLEHRAANPVP------------LGTIMQPYLKNRKSVT 776
            :|   ..|:|:|            :|..:.|.|....:.|
  Fly   690 EW---SPASPLPQIDNQMDPVDRVMGPPVNPRLPRLSAAT 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pavNP_477025.1 KISc_KIF23_like 35..450 CDD:276819 119/416 (29%)
Kinesin 42..452 CDD:278646 119/418 (28%)
MKLP1_Arf_bdg 735..837 CDD:293148 9/54 (17%)
Kif19ANP_996208.1 Motor_domain 35..371 CDD:277568 117/412 (28%)
Kinesin 41..371 CDD:278646 117/406 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437969
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.