DRSC/TRiP Functional Genomics Resources

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Protein Alignment pav and Khc-73

DIOPT Version :9

Sequence 1:NP_477025.1 Gene:pav / 38515 FlyBaseID:FBgn0011692 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster


Alignment Length:992 Identity:221/992 - (22%)
Similarity:378/992 - (38%) Gaps:317/992 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ARDPVNVFCRVRPLQSDADLTSLRVKNSTTIALNPQDQLLQHHKPHNGAQRE--VQYIFKHVF-- 93
            |.|.:.|..||||.    :...:.:.....:.:..|..:||:..|....:|:  ..:.|.|.|  
  Fly     2 ASDKIKVAVRVRPF----NRREIELDTKCIVEMEKQQTILQNPPPLEKIERKQPKTFAFDHCFYS 62

  Fly    94 -QPD----ATQQDVYAAVAQPLVENLLKGRNSLLFTYGVTGSGKTYTMTGNLRHRGIMPRCLDVL 153
             .|:    |:|:.|:..|.:.:::|..:|.|:.:|.||.|||||:|||.|....:||:||..|.|
  Fly    63 LNPEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGIIPRLCDQL 127

  Fly   154 FRTISDYQAKKFVFKPDKLNGFEILSEEDALLERQHEMNQRFAGSGRFAFRHKDSDPEIASQASV 218
            |..|::                                               .|.||:      
  Fly   128 FSAIAN-----------------------------------------------KSTPEL------ 139

  Fly   219 EPIPLLGLDEDNMYSVFVTYIEIYNNSVYDLLEDSGIQKTLQSKIIREDANRHMFVHGVTEVEVK 283
                        ||.|.|:|:||||..|:|||:....:::|:   :||......:|.|::::.|.
  Fly   140 ------------MYKVEVSYMEIYNEKVHDLLDPKPNKQSLK---VREHNVMGPYVDGLSQLAVT 189

  Fly   284 TVEDALEVFQMGQKRKRMGHTVLNAESSRSHSVFNIRLVQAPTDSQGENVVQDRQNITVSQLSLV 348
            :.:|...:...|.|.:.:..|.:||||||||:||::.|.|..|| |...|..::    ||::|||
  Fly   190 SYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTD-QATGVSGEK----VSRMSLV 249

  Fly   349 DLAGSERSSRTKNTGVRLREAGNINNSLMTLRTCLEYLRENQLAASNGLAPKKVPYRDSKITHMF 413
            |||||||:.:|...|.||:|..|||.||.||...:..|.:......:| ..|.||||||.:|.:.
  Fly   250 DLAGSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSG-NDKFVPYRDSVLTWLL 313

  Fly   414 KNYFDGEGQVSMIVCINPRIEDYDENMQVMKFAEMTQEVQIARATPMKQDLGLTPGRRKANKLFK 478
            |:...|..:..|:..|:|..::|:|.:..:::|:..:  :|.....:.:|    |..|...:| :
  Fly   314 KDNLGGNSRTVMVATISPSADNYEETLSTLRYADRAK--RIVNHAVVNED----PNARIIREL-R 371

  Fly   479 IAVNNLNEL-----GIP---------EAKDLEVDVGLVYSLGPDFPAYEMDSPEAQIKIRELMHY 529
            ..|..|..:     |.|         |:::|...:...:.             |..:|...:.:.
  Fly   372 HEVETLRSMLKHATGSPVGDVQDKLAESENLMKQISQTWE-------------EKLVKTERIQNE 423

  Fly   530 LEQRIEKRKKLRANLDIKCDSFRQMLMNLDRDNLQLRTELASLKAVYKQER-------------- 580
            .:|.:||.........||.:..:..|:||:.|     ..|..|...|.::|              
  Fly   424 RQQALEKMGISVQASGIKVEKNKYYLVNLNAD-----PSLNELLVYYLKDRTLIGGRTISGQQPD 483

  Fly   581 ----------------------------------DRSAALEK-----------------KVRIHE 594
                                              :.|||:||                 :|...:
  Fly   484 IQLSGLGIQPEHCVITIEDSGLYMEPVQGARCFVNGSAAVEKTPLQNGDRILWGNHHFFRVNSPK 548

  Fly   595 SSIDVLNNTLSKQE----RQIEELTFKLNE-KENMLT-----------QKEHEKEKQKKKFSSKL 643
            |:    |.::...|    .|:.:..|..:| .:|.|:           :::||::||        
  Fly   549 SN----NTSMCASEPQTPAQLIDYNFARDEIMQNELSNDPIQTAIARLERQHEEDKQ-------- 601

  Fly   644 AVESDKNKREFELKLREQRVKLQ-------------------------ERMRI------KDEKLR 677
             |..:|.::|:|.:.::.|..|.                         .:||:      :||..|
  Fly   602 -VALEKQRQEYERQFQQLRNILSPSTPYAPYAPYDPLRMGKITPNTPTSQMRVEKWAQERDEMFR 665

  Fly   678 -----LVSNILQSEDLPSLPRSQSSENILNEKDRGAYTARTEESSVPATRTDIYATPRHGAAAAN 737
                 |.::|:::..|.......:.|  :.:|.:.:.|.:...:::...|       |.||..:.
  Fly   666 RSLGQLKTDIMRANSLVQEANFLAEE--MEKKTKFSVTLQIPPANLSPNR-------RRGAFVSE 721

  Fly   738 NR--HRRSRSAGDKWLEHRAANPVPLGTIMQPYLKNRKSVTKLTDLKELTAHGTTKYCLVSQDAD 800
            ..  .:|:.|....|...:..|                   ||.|::|:......: .|...|.|
  Fly   722 PAILVKRTNSGSQIWTMEKLEN-------------------KLIDMREMYQEHKER-VLNGLDED 766

  Fly   801 TDGDVETKLYKG----NVIPTCGGGAQVVFNDVECLKQKSPVHSPTRKRPSNGNISALGGGAVPS 861
             :...:...|:.    |:|.......:|:|:||     |...|:|.        ||..|      
  Fly   767 -NAKPQDPFYESQENHNLIGVANIFLEVLFHDV-----KLDYHTPI--------ISQQG------ 811

  Fly   862 TVTSAQDVASRCNLGIE 878
                  :||.|..:.||
  Fly   812 ------EVAGRLQVEIE 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pavNP_477025.1 KISc_KIF23_like 35..450 CDD:276819 126/423 (30%)
Kinesin 42..452 CDD:278646 124/418 (30%)
MKLP1_Arf_bdg 735..837 CDD:293148 19/107 (18%)
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 127/434 (29%)
KISc 6..359 CDD:214526 126/432 (29%)
Kinesin_assoc 356..468 CDD:292801 24/134 (18%)
FHA 446..546 CDD:238017 14/104 (13%)
KIF1B 741..786 CDD:289208 11/65 (17%)
DUF3694 <1196..1252 CDD:289256
CAP_GLY 1786..1850 CDD:279625
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437753
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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