DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pav and nod

DIOPT Version :9

Sequence 1:NP_477025.1 Gene:pav / 38515 FlyBaseID:FBgn0011692 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_001285129.1 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster


Alignment Length:847 Identity:167/847 - (19%)
Similarity:306/847 - (36%) Gaps:250/847 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ADLTSLRVKNSTTIALNPQDQLLQHHKP--------HNGAQREV---QYIFKHVFQPDATQQDVY 103
            |.|:::|:    .:...|..|.|...:|        .:|....|   ::.|.|.|....:|.::|
  Fly     4 AKLSAVRI----AVREAPYRQFLGRREPSVVQFPPWSDGKSLIVDQNEFHFDHAFPATISQDEMY 64

  Fly   104 AAVAQPLVENLLKGRNSLLFTYGVTGSGKTYTM----TGNL--RHRGIMPRCLDVLFRTISDYQA 162
            .|:..|||:.||:|.......||.||:||:|:|    .|.:  .|.||:||.|..:|..::..|.
  Fly    65 QALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQE 129

  Fly   163 KKFVFKPDKLNGFEILSEEDALLERQHEMNQRFAGSGRFAFRHKDSDPEIASQASVEPIPLLGLD 227
                            :.:||:                                           
  Fly   130 ----------------NNKDAI------------------------------------------- 135

  Fly   228 EDNMYSVFVTYIEIYNNSVYDLLEDSGIQKTLQSKIIREDANRHMFVHGVTEVEVKTVEDALEVF 292
                 .|:.::|||||...:|||..:.....:.::..|           .|.:.:.:..|...:.
  Fly   136 -----QVYASFIEIYNEKPFDLLGSTPHMPMVAARCQR-----------CTCLPLHSQADLHHIL 184

  Fly   293 QMGQKRKRMGHTVLNAESSRSHSVFNIRLVQAPTDSQGENVVQDRQNITVSQLSLVDLAGSERSS 357
            ::|.:.:|:..|.:|:.|||||::..|. |::.|..              |::::|||||||...
  Fly   185 ELGTRNRRVRPTNMNSNSSRSHAIVTIH-VKSKTHH--------------SRMNIVDLAGSEGVR 234

  Fly   358 RTKNTGVRLREAGNINNSLMTLRTCLEYLRENQLAASNGLAPKKVPYRDSKITHMFKNYFDGEGQ 422
            ||.:.||..:|..|||..|:::         |::..|.......:|||||.:|.:.:.....:..
  Fly   235 RTGHEGVARQEGVNINLGLLSI---------NKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSY 290

  Fly   423 VSMIVCINPRIEDYDENMQVMKFAEMTQE-----VQIARATPMKQDLG--LTPGRRKA---NKLF 477
            ::.:.||:|...|..|.:..::|....::     :|:||   .||.|.  .|...|:|   :...
  Fly   291 LTFLACISPHQCDLSETLSTLRFGTSAKKLRLNPMQVAR---QKQSLAARTTHVFRQALCTSTAI 352

  Fly   478 KIAVNNLNELGIPEAKDLEVDVGLVYSLGPDFPAYEMDSPEAQIKIRELMHYLEQRIEKRKKLRA 542
            |....|.|.:.:|::|                  |....|     :..::|        |.:...
  Fly   353 KSNAANHNSIVVPKSK------------------YSTTKP-----LSAVLH--------RTRSEL 386

  Fly   543 NLDIKCDSFRQMLMNLDRDNLQLRTELASLKAVYKQERDRSAALEKKVRIHESSIDVLN-NTLSK 606
            .:..|.....:.|:.|:...|:|                      ..:.|.:||:.:|. ::.|.
  Fly   387 GMTPKAKKRARELLELEETTLEL----------------------SSIHIQDSSLSLLGFHSDSD 429

  Fly   607 QERQI------EELTFKLNEKENMLTQKEHEKEKQKKKFS---------------------SKLA 644
            ::|.:      :|.....::...::...|..:.|:..|..                     |.::
  Fly   430 KDRHLMPPPTGQEPRQASSQNSTLMGIVEETEPKESSKVQQSMVAPTVPTTVRCQLFNTTISPIS 494

  Fly   645 VESDKNKREFE-LKLREQRVKLQERMRIKDEKLRLVSNILQSEDLPSLPRSQSSENILNEKDRGA 708
            :.:..::||.. ::..|:.|....:.......:||.|: ::|::..::|:..:    |....|.|
  Fly   495 LRASSSQRELSGIQPMEETVVASPQQPCLRRSVRLASS-MRSQNYGAIPKVMN----LRRSTRLA 554

  Fly   709 YTARTEESSVPATRTDIYATPRHGAAAANNRHRRSRSAGDKWLEHRAANPVPLGTIMQPYLKNRK 773
            .......|.|....||  |.|...:.....|.|..:.|...|:    ||    .|.....|.|..
  Fly   555 GIREHATSVVVKNETD--AIPHLRSTVQKKRTRNVKPAPKAWM----AN----NTKCFLDLLNNG 609

  Fly   774 SVTKLTDLK--------ELTAHGTTKYCLVSQDADTDGDVETKLYKGNVIPTCGGGAQVVFNDVE 830
            :|.:|.::.        .|..|.:...|.            ..|::...:|...|.....|..:.
  Fly   610 NVKQLQEIPGIGPKSAFSLALHRSRLGCF------------ENLFQVKSLPIWSGNKWERFCQIN 662

  Fly   831 CL 832
            ||
  Fly   663 CL 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pavNP_477025.1 KISc_KIF23_like 35..450 CDD:276819 95/416 (23%)
Kinesin 42..452 CDD:278646 95/423 (22%)
MKLP1_Arf_bdg 735..837 CDD:293148 20/106 (19%)
nodNP_001285129.1 KISc 8..325 CDD:214526 93/419 (22%)
KISc 8..318 CDD:276812 93/412 (23%)
ComEA 540..648 CDD:224472 25/133 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437904
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.