DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pav and klp9

DIOPT Version :9

Sequence 1:NP_477025.1 Gene:pav / 38515 FlyBaseID:FBgn0011692 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_001342762.1 Gene:klp9 / 2539778 PomBaseID:SPBC15D4.01c Length:633 Species:Schizosaccharomyces pombe


Alignment Length:696 Identity:179/696 - (25%)
Similarity:306/696 - (43%) Gaps:135/696 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VNVFCRVRPLQSDADLTS----LRVKNSTTIAL-NPQDQLLQHHKPHNGAQREVQYIFKHVFQPD 96
            :.:|.||:..|..:|.::    |.|.|...|.| :|:|   .|....:.::...:..|..||.|.
pombe     2 IQIFLRVKKAQPSSDASNKYGFLTVLNDYEILLESPED---SHAYRVSKSKTLEKASFTKVFPPS 63

  Fly    97 ATQQDVYAAVAQPLV-ENLLKGRNSLLFTYGVTGSGKTYTMTGNLRHRGIMPRCLDVLFRTISDY 160
            .||.||::.:..||: ::|:...::||||.||:|:|||||:.|.....|:....||.||..|...
pombe    64 CTQLDVFSTICAPLIADSLVNMNDTLLFTLGVSGAGKTYTLFGPSDRPGVAFLALDALFYAIKGR 128

  Fly   161 QAKKFVFKPDKLNGFEILSEEDALLERQHEMNQRFAGSGRFAFRHKDSD---PEIASQASVEPIP 222
            :|     .|..:.......|:..::|           :.:|.......|   |.....||..|  
pombe   129 EA-----SPQTVEFLRSQLEKCKIVE-----------ASKFLRGEAPLDIKVPNTEYYASHFP-- 175

  Fly   223 LLGLDEDN-MYSVFVTYIEIYNNSVYDLLEDS---GIQKTLQSKIIREDANRHMFVHGVTEVEVK 283
              .::|.| .|::::::.||||:.::||||.:   |.:..|..|  :...:....:.|:.:|.|.
pombe   176 --KIEEKNYQYAIYLSFAEIYNDRIFDLLEKASFFGHRHALSLK--KSSTSDKKSIAGIQKVFVS 236

  Fly   284 TVEDALEVFQMGQKRKRMGHTVLNAESSRSHSVFNIRLVQAPTDSQGENVVQDRQNITVSQLSLV 348
            ...:|.::.|...:.::...|..|:.|||||.:.:|.|.:..|.|         ......|:.||
pombe   237 NTTEAYKLIQKVLQLRKSTSTKSNSVSSRSHLIMSIELFKVCTKS---------NKFESCQIDLV 292

  Fly   349 DLAGSERSSRTKNTGVRLREAGNINNSLMTLRTCLEYLRENQLAASNGLAPKKVPYRDSKITHMF 413
            |||||||:...:.:|:.|||..:||.||:||..|||.||.......:     .:|:|.||:|.:.
pombe   293 DLAGSERTRSAETSGLLLREGASINRSLLTLGQCLEALRRKHEGKQH-----IIPFRQSKLTELL 352

  Fly   414 --KNYFDGEGQVSMIVCINPRIEDYDENMQVMKFAEMTQEVQIARATPMKQDLGLTPGRRKANKL 476
              ..:..|...::|:|.|:| ...:|||.|||:::...:|:             |.|        
pombe   353 FHSGHLSGLAGINMLVNIDP-FGSFDENAQVMRYSANAREI-------------LPP-------- 395

  Fly   477 FKIAVNNLNELGIPEAKDLEVDVGLVYSLGPDFPAYE-MDSPEAQIKIRELMHYLEQRIEKRKKL 540
                  .|||                 :.|...|::. :...:.....:.|..:|||..::.::|
pombe   396 ------PLNE-----------------NSGSQSPSHSLLQKSKNTSSTKALTSHLEQLQQENQQL 437

  Fly   541 RANLDIKCDSFRQMLMNLDRDNLQLRTELASLKAVYKQERDRSAALEKK--VRIHESS---IDVL 600
            |..|   .|:..:| |||:.:..|..|         ::..:|.:.:|:.  .::.|.|   |:..
pombe   438 RMLL---ADADSEM-MNLEYEIRQQMT---------REMEERVSEVERTFLTKLLEESAQGIEYT 489

  Fly   601 NNTLSKQERQIEELTFKLNEKENMLTQKE------HEK----EKQKKKFSSKLAVESDKNKREFE 655
            :..|.|....:::|..:.:||...:.|.|      ||:    |::..|.||......:::||...
pombe   490 DQKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRSLEEESIKESSATQQNENQHKRSSR 554

  Fly   656 LKLREQRVKLQERMRIKDE-KLRLVSNILQSEDLPSLPRSQSSENI 700
            ..|.|.:..:||...|..: ||...|.::|:      |.|...||:
pombe   555 KLLYEDKQAIQEAHTINTKRKLWPQSTLIQA------PNSDDEENV 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pavNP_477025.1 KISc_KIF23_like 35..450 CDD:276819 124/427 (29%)
Kinesin 42..452 CDD:278646 123/424 (29%)
MKLP1_Arf_bdg 735..837 CDD:293148
klp9NP_001342762.1 KIP1 40..633 CDD:227392 167/655 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006430
OrthoInspector 1 1.000 - - otm47185
orthoMCL 1 0.900 - - OOG6_104864
Panther 1 1.100 - - O PTHR24115
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R641
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.940

Return to query results.
Submit another query.