DRSC/TRiP Functional Genomics Resources

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Protein Alignment pav and Kif20a

DIOPT Version :9

Sequence 1:NP_477025.1 Gene:pav / 38515 FlyBaseID:FBgn0011692 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_001159878.1 Gene:Kif20a / 19348 MGIID:1201682 Length:887 Species:Mus musculus


Alignment Length:948 Identity:243/948 - (25%)
Similarity:399/948 - (42%) Gaps:212/948 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EKQR--RDTSDKARDPVNVFCRVRP-----LQSDADLTSLRVKNSTTIALN-PQDQLLQHHKPHN 79
            :||.  .|||:|    |.|:.|:||     |....|...:.::|:.|:.|. |:|..........
Mouse    52 DKQALLEDTSEK----VKVYLRIRPFLTSELDRQEDQGCVCIENTETLVLQAPKDSFALKSNERG 112

  Fly    80 GAQREVQYIFKHVFQPDATQQDVYAAVAQPLVENLLKGRNSLLFTYGVTGSGKTYTMTGNLRHRG 144
            ..|...::.|..:|.|:..|...:....:.:|:::|||:|.|::|||||.||||||:.|..:..|
Mouse   113 VGQATHKFTFSQIFGPEVGQVAFFNLTMKEMVKDVLKGQNWLIYTYGVTNSGKTYTIQGTSKDAG 177

  Fly   145 IMPRCLDVLFRTISDYQAKKFVFKPDKLNGFEILSEE----DALLERQHEMNQ------------ 193
            |:|:.|.::|.::..........||       :||.|    |:...||.||.:            
Mouse   178 ILPQSLALIFNSLQGQLHPTPDLKP-------LLSNEVIWLDSKQIRQEEMKKLSLLIGGLQEEE 235

  Fly   194 -------------RFAGSGRF--------------AFRHKDSDPEIASQASVEPIPLLGLDEDNM 231
                         |...|..|              :....|...::.:|....|:   .:..|..
Mouse   236 LSTSVKKRVHTESRIGASNSFDSGVAGLSSTSQFTSSSQLDETSQLWAQPDTVPV---SVPADIR 297

  Fly   232 YSVFVTYIEIYNNSVYDLLEDSGIQKTLQSKIIREDANRHMFVHGVTEVEVKTVEDALEVFQMGQ 296
            :||::::.||||..:|||||....|...|:..:.||.|.:.:|..:..:.|:.||:|.::.::|:
Mouse   298 FSVWISFFEIYNELLYDLLEPPSHQHKRQTLRLCEDQNGNPYVKDLNWIHVRDVEEAWKLLKVGR 362

  Fly   297 KRKRMGHTVLNAESSRSHSVFNIRLVQAPTDSQGENVVQDRQNITVSQLSLVDLAGSERSSRTKN 361
            |.:....|.:|.:||||||:|:||::..    |||..:..:    :|:|||.|||||||....| 
Mouse   363 KNQSFASTHMNQQSSRSHSIFSIRILHL----QGEGDIVPK----ISELSLCDLAGSERCKHQK- 418

  Fly   362 TGVRLREAGNINNSLMTLRTCLEYLRENQLAASNGLAPKKVPYRDSKITHMFKNYFDGEGQVSMI 426
            :|.||:||||||.||.||..|:..||:||   .|......:|:||||:|.:|:.:|.|.|:..||
Mouse   419 SGERLKEAGNINTSLHTLGRCIAALRQNQ---QNRSKQNLIPFRDSKLTRVFQGFFTGRGRSCMI 480

  Fly   427 VCINPRIEDYDENMQVMKFAEMTQEVQIARATPM------------KQDLGLTPGRRKANKLFKI 479
            |.:||....|||.:...||:.:..  |:..|.|:            |....:.||..|.:|    
Mouse   481 VNVNPCASTYDETLHAAKFSALAS--QLVHAPPVHLGIPSLHSFIKKHSPQVGPGLEKEDK---- 539

  Fly   480 AVNNLNELGIPEAKDLEVDVGLVYSLGPDFPAYEMDSPEAQIKI-----RELMHYLEQRIEKRKK 539
                       ...|||                  ||||.:..:     .||:    |.:|..|.
Mouse   540 -----------ADSDLE------------------DSPEDEADVSVYGKEELL----QVVEAMKA 571

  Fly   540 LRANLDIKCDSFRQMLMNLDRDNLQLRTELASLKAVYKQERDR--SAALEKK----VRIHESSID 598
            |..       ..||..:.|:   :|||.|:.:......|:|::  |..|:.:    ..::|..:.
Mouse   572 LLL-------KERQEKLQLE---IQLREEICNEMVEQMQQREQWCSERLDNQKELMEELYEEKLK 626

  Fly   599 VLNNTLSK-QERQIEELTFKLNEKENMLTQKEHEKEKQKK------KFSSKLAVE-SDKNKREFE 655
            :|..:|:. .:.||:|...|:.|.|.:|.:.:.:...|:.      :.|.:||.. |.:..:|.:
Mouse   627 ILKESLTTFYQEQIQERDEKIEELETLLQEAKQQPAAQQSGGLSLLRRSQRLAASASTQQFQEVK 691

  Fly   656 LKLREQRVKLQERMRIKDEKLRLVSNILQSEDLPSLPRSQSSENILNEKDRGAYTARTE-----E 715
            .:|.:.:.:|..    ...:|.....:|:... |:.|.:...:..|.|..:.....|||     :
Mouse   692 AELEQCKTELSS----TTAELHKYQQVLKPPP-PAKPFTIDVDKKLEEGQKNIRLLRTELQKLGQ 751

  Fly   716 SSVPATRTDIYATPRHGAAAANNRHRRSRSAGDKWLEHRAANPVPLGTIMQPYLKNRKSVTKLTD 780
            |...|.|...::|      .|....:...:..|..::...       |:.:  |:|...:.|| |
Mouse   752 SLQSAERACCHST------GAGKLRQALTNCDDILIKQNQ-------TLAE--LQNNMVLVKL-D 800

  Fly   781 LKELTAHGTTKYCLVSQDADTDGDVETKLYKGNVIPTCGGGAQVVFNDVECLKQKSPVHSPTRKR 845
            |::..|....:|..|.:   ..|....|...|             .|.    :.:.|.|.|..|:
Mouse   801 LQKKAACIAEQYHTVLK---LQGQASAKKRLG-------------ANQ----ENQQPNHQPPGKK 845

  Fly   846 PSNGNISALGGGAVPSTVT--SAQDVASRCNLGIEGHS 881
            |...|:       :|.|.|  |:.|.:....:....||
Mouse   846 PFLRNL-------LPRTPTCQSSTDSSPYARILRSRHS 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pavNP_477025.1 KISc_KIF23_like 35..450 CDD:276819 145/463 (31%)
Kinesin 42..452 CDD:278646 143/458 (31%)
MKLP1_Arf_bdg 735..837 CDD:293148 16/101 (16%)
Kif20aNP_001159878.1 KISc_KIF23_like 62..504 CDD:276819 146/467 (31%)
Kinesin 69..505 CDD:278646 143/459 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 527..553 11/58 (19%)
GBP_C <536..651 CDD:303769 34/161 (21%)
coiled coil 620..631 CDD:293879 2/10 (20%)
coiled coil 640..651 CDD:293879 4/10 (40%)
Globular. /evidence=ECO:0000255 805..887 20/99 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 826..875 13/72 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0247
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D314538at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R641
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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