DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sqor and Sqor

DIOPT Version :10

Sequence 1:NP_647877.1 Gene:Sqor / 38514 FlyBaseID:FBgn0035515 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_067482.4 Gene:Sqor / 59010 MGIID:1929899 Length:450 Species:Mus musculus


Alignment Length:434 Identity:213/434 - (49%)
Similarity:289/434 - (66%) Gaps:8/434 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLLATHNHAPTAFSTRFLSTSRVNRERQECQVLVVGGGTGGCAMAAKLSSRLGSDKVVVLEPEDK 79
            |.|.|....|....|....|::.:.|     |||:|||.||..||.::..|:|::.|.::||.::
Mouse    20 LRLGTQQAGPLQLHTGACCTAKNHYE-----VLVLGGGAGGITMATRMKRRVGAENVAIVEPSER 79

  Fly    80 HYYQPMFTLIGGGMKRLDQSHRQMADVLPTKAKWVKEKALEFDPDNNTVSTSGGKTIKYDFLIIA 144
            |:|||::||:|.|.|.|..|.|....|:|:..:|::::..|.:||.|.:.|..||.|.|.:||||
Mouse    80 HFYQPIWTLVGAGAKELSLSVRSTLSVIPSGVQWIQDRVAELNPDENCIRTDSGKEISYRYLIIA 144

  Fly   145 TGLQLNYGKIPGLVEALETPDSNVCSIYSPKYVDHVYECLRRTNKGNAIFTFPNCPIKCAGAPQK 209
            .|:||:|.||.||.|....|  .:.|.||.|.|:..::.|:...:|||:|||||.|:||||||||
Mouse   145 LGIQLDYEKIKGLPEGFAYP--KIGSNYSVKTVEKTWKALQGFKEGNALFTFPNTPVKCAGAPQK 207

  Fly   210 IAYISEHYFRKMGRRDNVNIIYNTSLPVIFGVKHYAEALMKLIKRRNITLNVQRNLVEVRHKDNI 274
            |.|:||.||||.|:|...|||:||:|..|||||.||:||.::|:.|::::|.:.||:|||.....
Mouse   208 IMYLSEAYFRKTGKRPKANIIFNTALGTIFGVKKYADALQEIIRERDVSVNYKHNLIEVRPDKQE 272

  Fly   275 AVFEDLAKPGVHYEETYSMLHVTPPMSTPDVVANCKKLVTPTGFVDVDQLTLQHNKYSNVFAIGD 339
            ||||.|.|||..:...|.|||||||||.|||:.. ..:....|:||||:.||||.||.|||.|||
Mouse   273 AVFEILDKPGETHVIPYEMLHVTPPMSAPDVLKR-SPVADSAGWVDVDKETLQHKKYPNVFGIGD 336

  Fly   340 SASSPNSKTAAAAAAQSPVVFKNVMAAIEGKAPTDIYDGYSSCPIVTGYSSCILAEFDYNLTPVE 404
            ..:.|.||||||.||||.::.:.:...::.:.|...||||:|||:||||:..|||||||...|:|
Mouse   337 CTNLPTSKTAAAVAAQSGILDRTMCLIMKNQRPIKKYDGYTSCPLVTGYNRVILAEFDYTAQPLE 401

  Fly   405 TFPLDQSKERYSMFFMKKELMPVLYWKLMMNGYWNGPALMRKIF 448
            |||.||||||.:|:.||.::||.|||.:|:.|||.|||.:||:|
Mouse   402 TFPFDQSKERITMYLMKADMMPFLYWNMMLRGYWGGPAFLRKLF 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SqorNP_647877.1 FadH2 65..387 CDD:440215 157/321 (49%)
SqorNP_067482.4 FadH2 71..389 CDD:440215 154/317 (49%)

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