DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sqor and Aifm1

DIOPT Version :10

Sequence 1:NP_647877.1 Gene:Sqor / 38514 FlyBaseID:FBgn0035515 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_036149.1 Gene:Aifm1 / 26926 MGIID:1349419 Length:612 Species:Mus musculus


Alignment Length:363 Identity:71/363 - (19%)
Similarity:124/363 - (34%) Gaps:125/363 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LVVGGGTGGCAMAAKLSSR-LGSDKVVVLEPEDKHYYQPMFTLIGGGMKRLDQSHRQMADVLPTK 110
            |::||||...|.|..:.:| .|:..::|.|..:..|.:|..:      |.|..|.    |...||
Mouse   134 LLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLS------KELWFSD----DPNVTK 188

  Fly   111 A----KW-VKEKALEFDPDNNTVSTSGGKTIKYDFLIIATGLQLNYGKIPGLVEALETPDSNVCS 170
            .    :| .||:::.|.|.:..||......|:...:.:.||.::.:..:.|.:..|         
Mouse   189 TLQFRQWNGKERSIYFQPPSFYVSAQDLPNIENGGVAVLTGKKVVHLDVRGNMVKL--------- 244

  Fly   171 IYSPKYVDHVYECLRRTNKGNAIFTFPNCPIKCAGAPQKIAYISE---------HYFRKMG---- 222
                             |.|:.| ||..|.|...|.|:.::.|..         ..|||:|    
Mouse   245 -----------------NDGSQI-TFEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRA 291

  Fly   223 ----RRD--NVNII----YNTSLPVIFGVKHYAEAL------------------------MKLIK 253
                .|:  ::.:|    ..:.|....|.|..|..:                        |:.:|
Mouse   292 LEKISREVKSITVIGGGFLGSELACALGRKSQASGIEVIQLFPEKGNMGKILPQYLSNWTMEKVK 356

  Fly   254 RRNI---------TLNVQRNLVEVRHKDNIAVFEDLAKPGVHYEETYSMLHVTPPMSTPDVVANC 309
            |..:         ::.|....:.::.||...|..|.....|..|              |:|.   
Mouse   357 REGVKVMPNAIVQSVGVSGGRLLIKLKDGRKVETDHIVTAVGLE--------------PNVE--- 404

  Fly   310 KKLVTPTGFVDVD------QLTLQHNKYSNVFAIGDSA 341
               :..||.:::|      ::..:....||::..||:|
Mouse   405 ---LAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAA 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SqorNP_647877.1 FadH2 65..387 CDD:440215 64/345 (19%)
Aifm1NP_036149.1 Mitochondrial localization signal. /evidence=ECO:0000305|PubMed:9989411 1..30
AIF-MLS 51..>128 CDD:464407
Mitochondrial localization signal. /evidence=ECO:0000305|PubMed:9989411 62..88
FAD-dependent oxidoreductase 133..482 71/363 (20%)
NirB 147..595 CDD:440863 64/350 (18%)
Nuclear localization signal. /evidence=ECO:0000255 445..450
AIF_C 464..593 CDD:464279
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 512..551
Blue background indicates that the domain is not in the aligned region.

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