DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sqor and Pyroxd1

DIOPT Version :10

Sequence 1:NP_647877.1 Gene:Sqor / 38514 FlyBaseID:FBgn0035515 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_898988.2 Gene:Pyroxd1 / 232491 MGIID:2676395 Length:498 Species:Mus musculus


Alignment Length:183 Identity:42/183 - (22%)
Similarity:68/183 - (37%) Gaps:67/183 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LVVGGGTGGCAMAAKLSSRLGSDKVVVLEPEDKHYYQPMFTLIGGGMKRLDQSHRQMADVLPTKA 111
            :|||||..|...|.:|:.....:.::::..      .|:...:        .:.||::.||.   
Mouse    11 VVVGGGIAGVTCAEQLAVSFPEEDILLVTA------SPVIKAV--------TNFRQVSKVLE--- 58

  Fly   112 KWVKEKALEFDPDN--NTVSTSGGKTIKYDFLIIATGLQLNYGKIPGLVEALETPDSNVCSIYSP 174
                    |||.:.  .|:..|....||    :|.:|           |:.|::.|.  | |::.
Mouse    59 --------EFDVEEQPGTMLESRFPNIK----VIESG-----------VKQLKSEDH--C-IFTE 97

  Fly   175 KYVDHVYE--CLRRTNKGNAIFTFPNCPIKCAGAPQKIAYISEHYFRKMGRRD 225
            ...:.||:  ||                  ||||..|:.|  |...|.:|.||
Mouse    98 DGREFVYKKLCL------------------CAGAKPKLIY--EGNPRVLGIRD 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SqorNP_647877.1 FadH2 65..387 CDD:440215 34/165 (21%)
Pyroxd1NP_898988.2 NirB 84..495 CDD:440863 20/70 (29%)

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