DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sqor and C26D10.3

DIOPT Version :10

Sequence 1:NP_647877.1 Gene:Sqor / 38514 FlyBaseID:FBgn0035515 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_495754.3 Gene:C26D10.3 / 182937 WormBaseID:WBGene00007744 Length:475 Species:Caenorhabditis elegans


Alignment Length:423 Identity:80/423 - (18%)
Similarity:153/423 - (36%) Gaps:100/423 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LVVGGGTGGCAMAAKL--SSRLGSDKVVVLEPEDKHYYQPMFTLIGGGMKRLDQSHRQMADVLP- 108
            ::||||..|.:.|:::  ..|..:.:|:::...........:..||...::.|.......::.| 
 Worm     4 IIVGGGIAGVSCASQMLQLERSANLEVIIISASSFVKSVENYQKIGQYGEKFDVKETNCHELFPD 68

  Fly   109 TKAKWVKEKALEFDPDNNTVSTSGGKTIKYDFLIIATG------------------------LQL 149
            ::.:::.:..:.:|...|.:.....:.:|||.|.||||                        :||
 Worm    69 SRIRFLNDTVVTWDSSKNEIHLQNNEKLKYDKLCIATGSRPKFQKELGIDRRIVFLRDTQSAIQL 133

  Fly   150 --------------NYGKIPGLVEALET-------PDSNVCSIYSPKYVDHVYE--CLRRTNKGN 191
                          |.|....|:..|:|       .|..:|:.:.|:.::...|  .|:....||
 Worm   134 KTKLKNAKNILIVGNGGIATELIFELKTFDVTWLIKDPWICASFFPEDIEQFIEKRLLKGRIDGN 198

  Fly   192 AIFTFPNCPIKCAGAPQKIAYISEHYFRKMGRRDNVNIIYNTSLPVIFGVKHYAEALMKLI--KR 254
                      |..|..:.:    :|........:|:|   |.|.|.: |....::...:.|  |.
 Worm   199 ----------KHDGQQKHL----QHVAASESVSENMN---NPSGPAL-GPDWCSQIDFQKISEKS 245

  Fly   255 RNITLNVQRNLVEVRHKDNIAVFEDLAKPGVHYEETYSML--HVTPPM--------STPDVVANC 309
            .|.::.:.||.|       |...:......|||.:...|.  .:.|.:        :..:|.|..
 Worm   246 ENRSVTILRNCV-------ITSTDTSQNLSVHYMDKEKMADNQLNPDIFIWAGGVTANSEVWAMN 303

  Fly   310 KKL-VTPTGFVDVDQLTLQHNKYSNVFAIGD----SASSPNS-----KTAAAAAAQSPVVFKNVM 364
            |.| :|....:.|:...  .....||||.||    :.:.|::     :....|..|..|..:.::
 Worm   304 KMLQITENSGIKVNDAC--ETSLPNVFACGDVCALTTTEPSTLWQQRQLWTQARQQGEVCGRAMV 366

  Fly   365 AAIEGKAPTDIY-DGYSSCPIVTGYSSCILAEF 396
            |.:|.....::| :.:|.|....|.....|.::
 Worm   367 AGVEEARMQNMYFELFSHCTTFFGLKVVFLGDY 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SqorNP_647877.1 FadH2 65..387 CDD:440215 72/392 (18%)
C26D10.3NP_495754.3 NirB 1..472 CDD:440863 80/423 (19%)

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