DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sqor and LOC1269496

DIOPT Version :10

Sequence 1:NP_647877.1 Gene:Sqor / 38514 FlyBaseID:FBgn0035515 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_061505798.1 Gene:LOC1269496 / 1269496 VectorBaseID:AGAMI1_014238 Length:621 Species:Anopheles gambiae


Alignment Length:359 Identity:69/359 - (19%)
Similarity:124/359 - (34%) Gaps:93/359 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LATHNHAPTAFSTRFLSTSRVNRERQECQVLVVGGGTGGCAMAAKLSSRLGSDKVVVLEPEDKHY 81
            |||:..      ||.::......:|   ..:|:|||..|...|..|.....:.::|::..|....
Mosquito   202 LATNKR------TRVMARRAAQDDR---TYVVIGGGPSGATCAETLRQEGFTGRIVMINKEPCLP 257

  Fly    82 YQPMFTLIGGGMKRLDQSHRQMADVLPTKAKWVKEKALE---------FDPDNNTVSTSGGKTIK 137
            |..:..     .|.:|.:   :..||....::..|..:|         .|...:.::...|..|:
Mosquito   258 YDRVKV-----SKTMDLN---LEKVLLRTQQFYDENDIEVMLGTAVTKLDGATHELTLDNGYKIR 314

  Fly   138 YDFLIIATGLQLNYGKIPGLVEALETPDSNVCSIYSPKYVDHVYECLRRTNKGNAIFTFPNCPIK 202
            ||...||||.......|.|      ....|||.:.:......|.|.|                  
Mosquito   315 YDKAYIATGSNPRRPPIEG------ASLGNVCVLRTAADAKQVNEQL------------------ 355

  Fly   203 CAGAPQKIAYI----------SEHYFRKMGRRDNVNIIYNTSLPV--IFGVKHYAEALMKLIKRR 255
               ||:|...|          :.:...|:.:   |.:|...::|:  .|| ....:.:|:|.:.:
Mosquito   356 ---APEKRVVILGTSFIGLEAAAYCVNKVAK---VTVIGRGAVPLKESFG-DAIGQRVMELFEEK 413

  Fly   256 NI----------TLNVQRNLVEVRHKDNIAVFEDLAKPGVHYEETYSMLHVTPPMSTPDVVANCK 310
            .:          .:..:..:.:|...|...:..|:...|:.     |.|: |..:....:..|  
Mosquito   414 GVQFVMNSGIRRCIGAEGTVQQVELTDGTLLDADICIFGIG-----STLY-TEFLQGSGISLN-- 470

  Fly   311 KLVTPTGFVDVDQLTLQHNKYSNVFAIGDSASSP 344
                ..|.::.||. |:.| ...|:..||.|::|
Mosquito   471 ----RNGSINTDQY-LESN-LEGVYVGGDIANAP 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SqorNP_647877.1 FadH2 65..387 CDD:440215 56/311 (18%)
LOC1269496XP_061505798.1 None

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