DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpL2 and paplna

DIOPT Version :9

Sequence 1:NP_728961.2 Gene:ImpL2 / 38513 FlyBaseID:FBgn0001257 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_005169942.1 Gene:paplna / 562930 ZFINID:ZDB-GENE-070815-4 Length:1187 Species:Danio rerio


Alignment Length:204 Identity:48/204 - (23%)
Similarity:83/204 - (40%) Gaps:29/204 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 PPTKLQQADGATIEIVCEMMGSQVPSIQWVVG-HLPRSELDDL---------DSNQVAEEAPSAI 118
            ||:..|::      :.|::..:..|..||... :..||....|         :||..|.|.....
Zfish   710 PPSNTQRS------LSCDLPNTVGPCDQWTSRFYFDRSASRCLHFWYGGCHGNSNNFASEEECQK 768

  Fly   119 VRVRS---SHIIDHVLS---EARTYTCVGRTGSKTIYASTVVHPPRSSRLTPEKTYPG----AQK 173
            :.:||   .....||||   ..|.:....:..|...:.:...|.|.|:.:  :::.|.    |:.
Zfish   769 MCLRSELRQRDQAHVLSLQHGRRRFPAHVQLSSSGAHRAQRAHQPASNAM--QQSNPAASWTAEG 831

  Fly   174 PRIIYTEKTHLD-LMGSNIQLPCRVHARPRAEITWLNNENKEIVQGHRHRVLANGDLLISEIKWE 237
            ..|..|:.:.:: |:|..:.|||||...|.:.:......:...|...||....:|.||:..|..:
Zfish   832 VSIDKTDPSTVEGLVGQRVVLPCRVTPPPSSAVLVEWRRDGVPVDPTRHEQQLDGSLLVGPITLQ 896

  Fly   238 DMGNYKCIA 246
            |.|.:.|:|
Zfish   897 DSGWFLCVA 905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpL2NP_728961.2 IGc2 187..251 CDD:197706 18/60 (30%)
paplnaXP_005169942.1 TSP1 24..75 CDD:214559
ADAM_spacer1 181..293 CDD:310520
TSP1 303..356 CDD:214559
TSP1 388..442 CDD:214559
TSP1 449..498 CDD:214559
TSP1 504..557 CDD:214559
KU 720..771 CDD:238057 11/50 (22%)
Ig_3 839..906 CDD:316449 19/67 (28%)
IGc2 960..1022 CDD:197706
I-set 1039..1121 CDD:333254
PLAC 1142..1173 CDD:312271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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