DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpL2 and lrit3a

DIOPT Version :9

Sequence 1:NP_728961.2 Gene:ImpL2 / 38513 FlyBaseID:FBgn0001257 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001122166.1 Gene:lrit3a / 558559 ZFINID:ZDB-GENE-080723-63 Length:636 Species:Danio rerio


Alignment Length:329 Identity:61/329 - (18%)
Similarity:108/329 - (32%) Gaps:116/329 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DSNDVDNSIEAEEEKPR----------NRAF----EADWLKFTKTPPTKLQQADGATIEIVCEMM 83
            |.:|:..::..:..|.|          ..||    |..:|..|....|.:.......::::.|:.
Zfish    47 DMSDIPVNVPLDTVKLRVEKTAVRRVPTEAFYYLSELRYLWITYNSITSVDPGSFYNLKVLHELR 111

  Fly    84 --GSQVPSIQW-VVGHLPRSELDDLDSNQ---VAEEAPSAIVRVRSSHIIDHVLSEARTYTCVGR 142
              |:.:.:..| .:..:|..:..||.:|:   |..||...::.:              ||..:..
Zfish   112 LDGNMIATFPWESLKEMPSLKTLDLHNNRLTSVPVEAAPYLINI--------------TYLDISS 162

  Fly   143 TGSKTIYASTV-VHPPRS----SRLTPEKTYPGAQ------------------------------ 172
            ....|:.:..| :.||.|    |..|.:||..|.|                              
Zfish   163 NKLTTLPSDLVDIWPPFSGIQPSANTSQKTVLGLQDNPWYCDCRISKLIELSKMAGIPVVLMDQV 227

  Fly   173 -----------------------KPRIIYTEKTHLDLMGSNIQLPCRVHARPRAEITWLNNE--- 211
                                   ||.::.:.......:|||:.|.|..:..|...:.|...:   
Zfish   228 LTCSGPEHLSGVLFQRAELDQCVKPTVMTSATKITSPLGSNVLLRCDANGFPTPTLLWTTADGSV 292

  Fly   212 -NKEIVQ-----GHRHRVLANGDLLISEIKWEDMGNYKCIARNVVGKDTA----------DTFVY 260
             |..:||     |.|..:|:     :..|.::|.|:|:|.|:||.|...|          .|..:
Zfish   293 VNNTVVQESPGEGVRWSILS-----LHSIVFKDAGDYRCKAKNVAGNAEAYITLSVDGVQPTTPF 352

  Fly   261 PVLN 264
            |.:|
Zfish   353 PPIN 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpL2NP_728961.2 IGc2 187..251 CDD:197706 21/72 (29%)
lrit3aNP_001122166.1 LRR_8 81..141 CDD:290566 11/59 (19%)
leucine-rich repeat 83..106 CDD:275378 3/22 (14%)
LRR_4 107..145 CDD:289563 7/37 (19%)
leucine-rich repeat 107..130 CDD:275378 3/22 (14%)
LRR_8 129..>171 CDD:290566 10/55 (18%)
LRR_4 129..170 CDD:289563 10/54 (19%)
leucine-rich repeat 131..154 CDD:275378 6/22 (27%)
leucine-rich repeat 155..168 CDD:275378 2/26 (8%)
TPKR_C2 199..249 CDD:301599 0/49 (0%)
Ig 252..343 CDD:299845 24/95 (25%)
IG_like 261..343 CDD:214653 23/86 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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