DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpL2 and Dscaml1

DIOPT Version :9

Sequence 1:NP_728961.2 Gene:ImpL2 / 38513 FlyBaseID:FBgn0001257 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001101611.1 Gene:Dscaml1 / 315615 RGDID:1304887 Length:2111 Species:Rattus norvegicus


Alignment Length:198 Identity:53/198 - (26%)
Similarity:72/198 - (36%) Gaps:37/198 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GATIEIVCEMMGSQVPSIQWVVGHLPRSELDDLDSNQVAEEAPSAIVRVRSSHIIDHVLSEARTY 137
            |..:|:.|...|..:|:|:|:....|.    ..||....        |:....|.|....::.||
  Rat   298 GHAVELPCAASGYPIPAIRWLKDGRPL----PADSRWAK--------RITGLTISDLRTEDSGTY 350

  Fly   138 TC-VGRT-GSKTIYASTVVHPPRSSRLTPEKTYPGAQKPRIIYTEKTHLDLMGSNIQLPCRVHAR 200
            .| |..| ||........|..|....|||:|...|                :||.:.|.|.:...
  Rat   351 ICEVTNTFGSAEANGVLTVIDPLHVTLTPKKLKTG----------------IGSTVILSCALTGS 399

  Fly   201 PRAEITWLNNENKEIV---QGHRHRVLANGDLLISEIKWEDMGNYKCIARNVVGKDTADTFVYPV 262
            |...|.|.  .|.|:|   :....|.|:|..||||..:....|.|:|.|....  .||..|...|
  Rat   400 PEFTIRWY--RNTELVLPGEAISIRGLSNETLLISSAQKSHSGAYQCFATRKA--QTAQDFAIIV 460

  Fly   263 LNE 265
            |.:
  Rat   461 LED 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpL2NP_728961.2 IGc2 187..251 CDD:197706 21/66 (32%)
Dscaml1NP_001101611.1 IG 101..173 CDD:214652
IGc2 101..168 CDD:197706
Ig 183..276 CDD:299845
IG_like 195..276 CDD:214653
I-set 291..369 CDD:254352 20/82 (24%)
IGc2 298..359 CDD:197706 18/72 (25%)
IGc2 386..447 CDD:197706 20/62 (32%)
I-set 466..560 CDD:254352
Ig 466..556 CDD:299845
IGc2 577..635 CDD:197706
IG_like 665..744 CDD:214653
Ig 673..739 CDD:143165
I-set 748..843 CDD:254352
Ig7_DSCAM 765..843 CDD:143211
I-set 849..942 CDD:254352
Ig 861..949 CDD:299845
FN3 945..1039 CDD:238020
FN3 1046..1143 CDD:238020
fn3 1151..1237 CDD:278470
FN3 1249..1340 CDD:238020
IGc2 1364..1428 CDD:197706
FN3 1442..1532 CDD:238020
FN3 1546..1618 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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