DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpL2 and Kirrel3

DIOPT Version :9

Sequence 1:NP_728961.2 Gene:ImpL2 / 38513 FlyBaseID:FBgn0001257 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_038937320.1 Gene:Kirrel3 / 315546 RGDID:1311382 Length:869 Species:Rattus norvegicus


Alignment Length:289 Identity:53/289 - (18%)
Similarity:97/289 - (33%) Gaps:95/289 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLLFGSIATVRGRAVDLVDDSNDVDNSIEAEEEKPRNRAFEADWLKFTKTPPTKLQQADGATI-- 76
            ::|.|.:.::|.        .:.::.:..|:..||   |....||:       |.:..:|||.  
  Rat   151 IILGGPVISLRA--------GDPLNLTCHADNAKP---AASIIWLR-------KGEVINGATYSK 197

  Fly    77 --------------------------EIVCEMMGSQVP-----SIQWVVGHLPRSEL-------- 102
                                      .|||......:|     |:...:.|.|...|        
  Rat   198 TLLRDGKRESIVSTLFISPGDVENGQSIVCRATNKAIPGGKETSVTIDIQHPPLVNLSVEPQPVL 262

  Fly   103 -DDLDSNQVAEEAPSAIVRVRSSHIIDHVLSEARTYTCVGRTGSKTIYASTVVHPPRSSRLTPEK 166
             |::.:...:.:|..|:.:.|.:. ..|::.||          |..:|.:||.:...|..::.|.
  Rat   263 EDNIVTFHCSAKANPAVTQYRWAK-RGHIIKEA----------SGELYRTTVDYTYFSEPVSCEV 316

  Fly   167 T--------------YPGAQKPRIIYTEKTHLDLMGSNIQLPCRVHARPRAEITWLNNENKEIVQ 217
            |              |.|   ||:....::.|..:||:....|.....|...|.|:...:..::.
  Rat   317 TNALGSTNLSRTVDVYFG---PRMTSEPQSLLVDLGSDAVFSCAWIGNPSLTIVWMKRGSGVVLS 378

  Fly   218 GHRHRVLANGDLLISEIKWEDMGNYKCIA 246
            ..:       .|.:..::.||.|.|.|.|
  Rat   379 NEK-------TLTLKSVRQEDAGKYVCRA 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpL2NP_728961.2 IGc2 187..251 CDD:197706 13/60 (22%)
Kirrel3XP_038937320.1 IG_like 54..143 CDD:214653
Ig strand A' 56..60 CDD:409353
Ig strand B 64..71 CDD:409353
Ig strand C 78..82 CDD:409353
Ig strand C' 84..87 CDD:409353
Ig strand D 97..101 CDD:409353
Ig strand E 104..116 CDD:409353
Ig strand G 132..143 CDD:409353
IgI_2_KIRREL3-like 149..246 CDD:409416 18/112 (16%)
Ig strand B 166..170 CDD:409416 0/3 (0%)
Ig strand C 180..184 CDD:409416 0/3 (0%)
Ig strand E 210..214 CDD:409416 0/3 (0%)
Ig strand F 224..229 CDD:409416 3/4 (75%)
Ig strand G 239..242 CDD:409416 0/2 (0%)
Ig <267..334 CDD:416386 14/77 (18%)
Ig strand B 267..274 CDD:409353 0/6 (0%)
Ig strand C 279..286 CDD:409353 1/6 (17%)
Ig strand C' 288..291 CDD:409353 1/2 (50%)
Ig strand D 298..302 CDD:409353 1/3 (33%)
Ig strand E 304..310 CDD:409353 0/5 (0%)
Ig strand G 321..334 CDD:409353 1/12 (8%)
Ig 335..416 CDD:416386 16/73 (22%)
Ig strand A' 343..347 CDD:409353 1/3 (33%)
Ig strand B 350..360 CDD:409353 2/9 (22%)
Ig strand C 365..371 CDD:409353 2/5 (40%)
Ig strand E 381..387 CDD:409353 1/12 (8%)
IgI_5_KIRREL3 418..515 CDD:409479
Ig strand B 436..440 CDD:409479
Ig strand C 450..454 CDD:409479
Ig strand E 481..485 CDD:409479
Ig strand F 496..501 CDD:409479
Ig strand G 509..512 CDD:409479
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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