DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpL2 and igcm-2

DIOPT Version :9

Sequence 1:NP_728961.2 Gene:ImpL2 / 38513 FlyBaseID:FBgn0001257 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001362087.1 Gene:igcm-2 / 180913 WormBaseID:WBGene00020130 Length:802 Species:Caenorhabditis elegans


Alignment Length:242 Identity:54/242 - (22%)
Similarity:89/242 - (36%) Gaps:81/242 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KFTKTP---------------------PTK---LQQADGATIEIVCEMMGSQVPSIQWVVGHLPR 99
            ||:|.|                     |:|   :.:..||.:...|:..|:..|.|.|     .|
 Worm   102 KFSKQPTRPEKGLSAKLVVNVPPVIISPSKNAIIHKKVGADLIFECKAEGAPSPEITW-----SR 161

  Fly   100 SELDDLDSNQVAEEAPSAIVRVRSSHIIDHVLSEARTYTCVGRTGSKTIYASTVVHPPRSSRLTP 164
            :|       |:...:|              ||:.:..     ..|.|.:|....|:...:|..:.
 Worm   162 NE-------QIISTSP--------------VLTLSNL-----EEGDKGLYTCLAVNIEGNSTSSI 200

  Fly   165 EKTYPGAQKPRIIYTEKTHLDLM--------GSNIQLPCRVHARPRA-EITWLNNEN--KEIVQG 218
            :          :.:|:.|.|||:        |||:...|..:|:..| ..:||..:.  |....|
 Worm   201 D----------VRFTKATILDLIPLNKTVIEGSNVFWHCHANAQATAISYSWLFEKKPIKTTSLG 255

  Fly   219 HRHRVLANGDLLISEIKWEDMGNYKCIARNVVGKDTADT----FVYP 261
            .|..: .:|||.:.:::..|.|.|.|.|:|..|:.|:.|    ..||
 Worm   256 LRSNI-RSGDLSLQDVRKSDSGWYTCEAKNSAGETTSSTAYLHVFYP 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpL2NP_728961.2 IGc2 187..251 CDD:197706 20/74 (27%)
igcm-2NP_001362087.1 IG_like 23..101 CDD:214653
Ig 124..200 CDD:386229 20/106 (19%)
IG_like 214..298 CDD:214653 23/84 (27%)
Ig_3 309..371 CDD:372822
Ig 389..467 CDD:386229
FN3 476..548 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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