DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr64Ab and Lcp4

DIOPT Version :9

Sequence 1:NP_647873.2 Gene:Cpr64Ab / 38509 FlyBaseID:FBgn0035511 Length:120 Species:Drosophila melanogaster
Sequence 2:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster


Alignment Length:123 Identity:33/123 - (26%)
Similarity:46/123 - (37%) Gaps:25/123 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIKITLICC--ALIAAIECALLPAAVPVGVPLNTEVDPHPQYAFAYNVQDALTGDSKSQQEVRDG 65
            :.||.|:|.  ||:||.|              |.||........|......|..|:.|.... .|
  Fly     1 MFKILLVCALVALVAANE--------------NPEVKELVNDVQADGFVSKLVLDNGSAASA-TG 50

  Fly    66 DV---VKGSYSVVDADGSLRTVFYTADPINGF----NAVVQRGPVPVAARPLVAPVAA 116
            ||   :.|.:..|..:|....|.|.||. ||:    :.:....|:|.|....:|.:.|
  Fly    51 DVHGNIDGVFEWVSPEGEHVRVSYKADE-NGYQPQSDLLPTPPPIPEAILKAIAYIQA 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr64AbNP_647873.2 Chitin_bind_4 42..94 CDD:278791 15/54 (28%)
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 13/42 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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