DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpr64Aa and Lcp1

DIOPT Version :10

Sequence 1:NP_647872.1 Gene:Cpr64Aa / 38508 FlyBaseID:FBgn0035510 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_476619.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster


Alignment Length:144 Identity:36/144 - (25%)
Similarity:55/144 - (38%) Gaps:46/144 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VAAPLVAKVAGPEPYDPNP-QYTFSYDVHDGSTGDVKSQ-------------------QETRSGD 84
            :.|.|...||.|    |.| ....|.|||    .||.||                   ::..|||
  Fly     7 ICAVLGLAVANP----PVPHSLGRSEDVH----ADVLSQSDDVRADGFDSSLHTSNGIEQAASGD 63

  Fly    85 V---VQGAYSLIEADGTRRIVEYTADPVHGFNAVVRREGAVVKAVAPVAKVLAPAPLLHASPLVA 146
            .   :.|.:..|..:|....|:|.|:. :|:    :..||.:....|:.:.:|.|        ||
  Fly    64 AHGNIHGNFGWISPEGEHVEVKYVANE-NGY----QPSGAWIPTPPPIPEAIARA--------VA 115

  Fly   147 KVPAYGPALAPAYP 160
            .:.::.|  ||.:|
  Fly   116 WLESHPP--APEHP 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr64AaNP_647872.1 Chitin_bind_4 60..112 CDD:459790 17/73 (23%)
Lcp1NP_476619.1 Chitin_bind_4 46..93 CDD:459790 9/47 (19%)

Return to query results.
Submit another query.