DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1299 and Gzmn

DIOPT Version :9

Sequence 1:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_038949596.1 Gene:Gzmn / 691668 RGDID:1597226 Length:465 Species:Rattus norvegicus


Alignment Length:351 Identity:91/351 - (25%)
Similarity:165/351 - (47%) Gaps:69/351 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 ASLLNELRSRSQDATFANFLRASNAVCQ------NKGTQVCCPTGQGITNTTPAPSQ----IVPK 235
            ::||.|          |..:...:|.|:      ::.|::|.    |..|...|||:    ....
  Rat   159 SALLEE----------AELIIQGDAECKKRFRHYSETTEICA----GDPNEIEAPSKGCVCSALL 209

  Fly   236 NTDEIPRR----------LLNVEEGCGSTVGYFKKIVGGEVSRKGAWPWIALLGYDDPSGSPFKC 290
            :...:|.:          ||.:|.|.       ::|:||...:..::|::|.:......|:...|
  Rat   210 HLSRLPGKMPPVLILLTLLLPLEAGA-------EEIIGGHEVKPHSYPYMAFIQSVKADGNISYC 267

  Fly   291 GGTLITARHVLTAAHCIRQDLQFVRLGEHDLSTDTETGHVDINIARYVSHPDYNRRNGRSDMAIL 355
            ||.|:....|||||||..:.:. |.||.|::....:|..: |::.:.:|||.||:.:...|:.:|
  Rat   268 GGFLVQDYFVLTAAHCEGESMT-VMLGAHNIKAKEDTQQI-ISVEKAISHPAYNKVDYSYDIMLL 330

  Fly   356 YLERNVEFTSKIAPICLPHT-ANLRQKSYVGYMPFVAGWGKT-MEGGESAQVLNELQIPIYDNKV 418
            .|:...:.|..::.:.||.: |.::.    |.:..|||||.| :.|.:.:..|.|.::.|.:::.
  Rat   331 KLKSKAKRTKAVSTLMLPQSDAQVKP----GDVCHVAGWGLTSINGTKVSSCLREAELIIQEDQE 391

  Fly   419 CVQSYAKEKRYFSADQFDKAVLCAGVLSGGKDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYGIG 483
            |      ||.::  :.|....:|||..:..:|..:|||||||:...      |.|  ||::||  
  Rat   392 C------EKIFY--NYFKTIQICAGDPNNVQDASKGDSGGPLVCDN------RAY--GVIAYG-- 438

  Fly   484 CARPNV-PGVYSSTQYFMDWIIQQVQ 508
             .:..: .||::...||:.||.:.::
  Rat   439 -KKGEISSGVFTKVVYFLPWISRNMK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1299NP_647862.1 CLIP 37..93 CDD:197829
CLIP 164..216 CDD:288855 7/40 (18%)
Tryp_SPc 260..503 CDD:214473 71/245 (29%)
Tryp_SPc 261..503 CDD:238113 71/244 (29%)
GzmnXP_038949596.1 Tryp_SPc 21..>194 CDD:238113 9/48 (19%)
Tryp_SPc 238..461 CDD:238113 73/247 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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