DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1299 and cfi

DIOPT Version :9

Sequence 1:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_017209949.1 Gene:cfi / 557557 ZFINID:ZDB-GENE-110922-7 Length:714 Species:Danio rerio


Alignment Length:586 Identity:134/586 - (22%)
Similarity:216/586 - (36%) Gaps:173/586 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SMCCVSAVITLLPLVLLPPPTVAQFNQRRQVRQNCITPENYYGSCVALTYCPQVVNIFQTTSRDR 67
            |||..:|:     ......||.:.|:      :.|.|.||                 .|||.|:.
Zfish   203 SMCQTNAI-----ACRANKPTFSHFS------RTCKTDEN-----------------VQTTFRNS 239

  Fly    68 AQRYVIALQRS------CGTR-SINGDPVICCTEPRYNPVTERPRNPFFPSESTFIGPQPPPEVP 125
            ..:.|:.:...      ||:. :|....|.|     .|..||..|.....|:..::    ..|..
Zfish   240 GDKRVLEIHSKKGKMLVCGSEWNIAAANVFC-----RNDSTEYYRGAERASKMQYV----ELEGE 295

  Fly   126 DNPFLIPTPRTT------TTTTTTTPAPIPDTSAAPLIEPRGTVCRGPDTKPGNCVEIKECASLL 184
            |.|......|.|      ...|...|.||.:.....:..     |....||.             
Zfish   296 DWPDQCMKVRCTGSELSLAECTIYNPTPIKEKQQVAVAN-----CYNETTKE------------- 342

  Fly   185 NELRSRSQDATFANFLRASNAV--CQNKGTQVCCPTGQGITNTTPAPSQI-VPKNT--------- 237
            ..::.|..:..:.|:.:..:.:  |.:...::||...|..||....||.: :|::.         
Zfish   343 QSMKFRCVNGKYVNYGKLCDGIDDCGDNSDEMCCQDCQKKTNAFWCPSGVCIPRHAVRDGVRDCL 407

  Fly   238 ---DEI----------PRRLL-----------------------NVE-----EGCGSTVGYFKKI 261
               ||:          |:...                       |::     |..||:....|::
Zfish   408 GGEDELEENGPIVENDPKEFFTDPLAEIKKIRSTAESKLQCGVPNMDYVYKAEDDGSSRQRRKRL 472

  Fly   262 VGGEVSRKGAWPW-IALLGYDDPSGSPFKCGGTLITARHVLTAAHCIRQDLQFVRL-------GE 318
            ||||.|......| :|:    ...|| ..|||..:....|||||||:|...:..|:       ..
Zfish   473 VGGEESLPTQIQWQVAI----QDEGS-IHCGGVYLGGCWVLTAAHCVRPKPKSFRVKFSLWRKNR 532

  Fly   319 HDLSTDTETGHVDINIARYVSHPDYNRRNGRSDMAILYLERNVEFTSK-------IAPICLPHTA 376
            ...:||:      |.:.:.:.|.:|:.:...:|:|::.|| .:..:.|       |..:|:|.:.
Zfish   533 KQSTTDS------IPVKKIIIHENYDAQTYVNDIALVQLE-ELNLSDKCMLDNPAIRAVCVPWST 590

  Fly   377 NLRQKSYVGYMP----FVAGWGKTMEGGESAQVLNELQIPIYDNKVCVQSYAKEKRYFSADQFDK 437
            .       .:.|    .::|||:. :.|.||.:|....:.|..:  | |::.|.:       |..
Zfish   591 Q-------QFQPNDTCTISGWGRD-KAGMSASILKWANVTIIGD--C-QNFYKHR-------FLP 637

  Fly   438 AVLCAGVLSGGKDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYGIGCARPNVPGVYSSTQYFMDW 502
            .:.|||.|.|..|:|||||||||:..:   .....|:.|:||:|..|..||.||||:...::.||
Zfish   638 GMECAGDLEGKVDSCQGDSGGPLVCKD---ASGLSYVWGIVSWGDKCGEPNHPGVYTKVAHYFDW 699

  Fly   503 I 503
            |
Zfish   700 I 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1299NP_647862.1 CLIP 37..93 CDD:197829 14/62 (23%)
CLIP 164..216 CDD:288855 6/53 (11%)
Tryp_SPc 260..503 CDD:214473 75/261 (29%)
Tryp_SPc 261..503 CDD:238113 75/260 (29%)
cfiXP_017209949.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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