DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1299 and cfd

DIOPT Version :9

Sequence 1:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001018368.1 Gene:cfd / 553553 ZFINID:ZDB-GENE-050522-411 Length:249 Species:Danio rerio


Alignment Length:252 Identity:77/252 - (30%)
Similarity:126/252 - (50%) Gaps:38/252 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 IVGGEVSRKGAWPWIALLGYDDPSGSPFKCGGTLITARHVLTAAHCIRQDLQF----VRLGEHDL 321
            |.||:.::..:.|::|.:.::    ...:|||.||:::.|::||||. ||.:.    |.||.|.|
Zfish    21 ITGGQEAKAHSRPYMASVQWN----GKHECGGFLISSQWVMSAAHCF-QDGRTSGVKVVLGAHSL 80

  Fly   322 STDTETGHV-DINIARYVSHPDYNRRNGRSDMAILYLERNVEFTSKIAPICL--PHTANLRQKSY 383
            |...:|... |   |...:|||::..|..:|:|::.|::.|..:..:.|:..  ..||:.::.:.
Zfish    81 SGAEDTKQTFD---AEVYNHPDFSISNYDNDIALIKLDKPVTQSDAVKPVKFQRDETADPKEAAV 142

  Fly   384 VGYMPFVAGWGKTMEGGESAQVLNELQIPIYDNKVCVQSYAKEKRYFSADQFDKAVLCAGVLSGG 448
            |.    .||||.....|.....|:||.||:.:...|      .:..|..::|...:|||.  ...
Zfish   143 VE----TAGWGSLNNMGGRPDKLHELSIPVMERWRC------GRADFYGEKFTSNMLCAA--DKR 195

  Fly   449 KDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYGIG--CARPNVPGVYSSTQYFMDWI 503
            ||||.|||||||:    |:|    .::|:.|.| |  |.....||:|:...::..||
Zfish   196 KDTCDGDSGGPLL----YRG----IVVGITSNG-GKKCGSSRKPGLYTIISHYASWI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1299NP_647862.1 CLIP 37..93 CDD:197829
CLIP 164..216 CDD:288855
Tryp_SPc 260..503 CDD:214473 75/250 (30%)
Tryp_SPc 261..503 CDD:238113 75/250 (30%)
cfdNP_001018368.1 Tryp_SPc 21..246 CDD:238113 77/252 (31%)
Tryp_SPc 21..243 CDD:214473 75/250 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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