DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1299 and Tpsab1

DIOPT Version :10

Sequence 1:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:332 Identity:102/332 - (30%)
Similarity:154/332 - (46%) Gaps:67/332 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 ATFANFLRASNAVCQNKGTQVCCPTGQGITNTTPAPSQIVPKNTDEIPRRLLNVEEGCGSTVGYF 258
            |..:|..|.::.|...|...:..|....:.:.  |||..:|:             ||        
  Rat    24 ALTSNRARTTHCVRMLKLLLLTLPLLSSLVHA--APSLAMPR-------------EG-------- 65

  Fly   259 KKIVGGEVSRKGAWPWIALLGYDDPSGSPFKCGGTLITARHVLTAAHCI----------RQDLQF 313
              ||||:.:....|||...|..:|.....| |||:||..:.|||||||:          |..|:.
  Rat    66 --IVGGQEASGNKWPWQVSLRVNDTYWMHF-CGGSLIHPQWVLTAAHCVGPNKADPNKLRVQLRK 127

  Fly   314 VRLGEHDLSTDTETGHVDINIARYVSHPDYNRRNGRSDMAILYLERNVEFTSKIAPICLPHTANL 378
            ..|..||        |: :.:::.:||||:......:|:|:|.|...|..||.:..:.||..:..
  Rat   128 QYLYYHD--------HL-LTVSQIISHPDFYIAQDGADIALLKLTNPVNITSNVHTVSLPPASET 183

  Fly   379 RQKSYVGYMPFVAGWGKTMEGGESAQ---VLNELQIPIYDNKVCVQSYAK-----EKRYFSADQF 435
            ...   |.:.:|.||| .:....|..   .|.|:|:||.:|::|...|.|     :..:...|. 
  Rat   184 FPS---GTLCWVTGWG-NINNDVSLPPPFPLEEVQVPIVENRLCDLKYHKGLNTGDNVHIVRDD- 243

  Fly   436 DKAVLCAGVLSGGKDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYGIGCARPNVPGVYSSTQYFM 500
               :||||  :.|.|:|||||||||:.    :.:..:...||||:|.|||:||.||:|:...|::
  Rat   244 ---MLCAG--NEGHDSCQGDSGGPLVC----KVEDTWLQAGVVSWGEGCAQPNRPGIYTRVTYYL 299

  Fly   501 DWIIQQV 507
            |||.:.|
  Rat   300 DWIYRYV 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1299NP_647862.1 CLIP 37..92 CDD:463440
CLIP 164..216 CDD:463440 5/21 (24%)
Tryp_SPc 261..503 CDD:238113 87/259 (34%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:238113 87/259 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.