DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1299 and CG11836

DIOPT Version :9

Sequence 1:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster


Alignment Length:270 Identity:91/270 - (33%)
Similarity:149/270 - (55%) Gaps:30/270 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 EGCGSTVGYFK---KIVGGEVSRKGAWPWIALLGYDDPSGSPFKCGGTLITARHVLTAAHCI--- 307
            :.|....|:..   :||||:.:....:||:|.:.||    ..|.|||:|:|..:||:||||:   
  Fly    82 KNCDCDCGFSNEEIRIVGGKPTGVNQYPWMARIVYD----GKFHCGGSLLTKDYVLSAAHCVKKL 142

  Fly   308 RQDLQFVRLGEHDLSTDTETGHVDINIARYVSHPDYNRRNGRSDMAILYLERNVEFTSKIAPICL 372
            |:....|..|:||....:|:..:...:...:.|..::.....:|:|:|.|.:.:.|:..|.||||
  Fly   143 RKSKIRVIFGDHDQEITSESQAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICL 207

  Fly   373 PHTANLRQKSY--VGYMPFVAGWGKTMEGGESAQVLNELQIPIYDNKVCVQSYAKEKRYFSADQF 435
            |      :.:|  .|.:..|.|||:|.||||...::|::::||.....|     :.:||.|. :.
  Fly   208 P------RYNYDPAGRIGTVVGWGRTSEGGELPSIVNQVKVPIMSITEC-----RNQRYKST-RI 260

  Fly   436 DKAVLCAGVLSGGKDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYGIGCARPNVPGVYSSTQYFM 500
            ..::||||..|  .|:|||||||||:|    ...::::::|:||:|:||.|...|||||....|:
  Fly   261 TSSMLCAGRPS--MDSCQGDSGGPLLL----SNGVKYFIVGIVSWGVGCGREGYPGVYSRVSKFI 319

  Fly   501 DWIIQQVQDT 510
            .||...:::|
  Fly   320 PWIKSNLENT 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1299NP_647862.1 CLIP 37..93 CDD:197829
CLIP 164..216 CDD:288855
Tryp_SPc 260..503 CDD:214473 86/247 (35%)
Tryp_SPc 261..503 CDD:238113 86/246 (35%)
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 88/249 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
21.910

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