DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1299 and plg

DIOPT Version :9

Sequence 1:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_958880.2 Gene:plg / 322691 ZFINID:ZDB-GENE-030131-1411 Length:818 Species:Danio rerio


Alignment Length:567 Identity:159/567 - (28%)
Similarity:223/567 - (39%) Gaps:162/567 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TPENYYGSCVAL--TYCPQVVN-----IFQTTSRDRAQRYVIALQRSCGTRSINGDPVI-----C 91
            :||||  .|..|  .||....|     .:.|   |...|:......|||.:....:|||     |
Zfish   317 SPENY--PCKGLDGNYCRNPDNERSPWCYTT---DPETRWEYCSVPSCGDQPRPEEPVIPQGEEC 376

  Fly    92 --------------------C-----TEPRYNPVTERPRNPFFPSES-------TFIGPQPP--- 121
                                |     .||..:..|  |:|  ||...       ...|.:.|   
Zfish   377 YEGDGSSYRGVMSETISGKKCQFWTSMEPHRHSKT--PQN--FPKADLRRNLCRNPDGDRAPWCY 437

  Fly   122 -------------------PEVPDNPFLIPTPRTTTTTTTTTPAPIPDTSAAPLIEPRGTVCRGP 167
                               |.:.:.|   ..|..||.|.:|.....||.||.          ...
Zfish   438 TTDPTVRWEYCNIERCDNRPNIQEPP---AKPAATTPTQSTPAQSTPDQSAP----------SEK 489

  Fly   168 DTKPGNCVEIKECASL------LNELRSRS--QDATFANFLRASNAV----CQNKGTQVCCPTGQ 220
            |.|.||..|.:...|:      ....||.:  |.|:|.........:    |:|..:.|   .|.
Zfish   490 DCKNGNGAEYRGSTSMTVMGVTCQAWRSMTPHQHASFTPETHPDKGLESNQCRNPDSDV---NGP 551

  Fly   221 GITNTTPAPSQIVPKNTD--EIPRRLLNVEE-GCGSTV----GYFKKIVGGEVSRKGAWPW-IAL 277
            ....|.|:      |..|  :||    :.|. .||...    ..|.:||||.||:..:||| |:|
Zfish   552 WCYTTDPS------KKWDYCQIP----DCESLKCGQPATKPKRCFGRIVGGCVSKPHSWPWQISL 606

  Fly   278 LGYDDPSGSPFKCGGTLITARHVLTAAHCI-RQD---LQFVRLGEHDLSTDTETGHVDINIARYV 338
                ...|....||||||..:.|:|||||: |.|   ...:.||.| ....||:...:.::.:.:
Zfish   607 ----RTRGKIHFCGGTLIDPQWVVTAAHCLERSDSPSAYKIMLGIH-TERATESSKQERDVTKII 666

  Fly   339 SHPDYNRRNGRSDMAILYLERNVEFTSKIAPICLPHTANLRQKSYVGYMP-----FVAGWGKTME 398
            ..|      ..:|:|:|.|:|......|::|:|||      :|.|:  :|     :|.|||:|.:
Zfish   667 KGP------AGTDIALLKLDRPALINDKVSPVCLP------EKDYI--VPSNTECYVTGWGETQD 717

  Fly   399 -GGESAQVLNELQIPIYDNKVCVQSYAKEKRYFSADQFDKAVLCAGVLSGGKDTCQGDSGGPLML 462
             |||.  .|.|...|:.:||||      .:..|...:.....:|||.:.||.|:|||||||||:.
Zfish   718 TGGEG--YLKETGFPVIENKVC------NRPSFLNGRVKDHEMCAGNIEGGNDSCQGDSGGPLVC 774

  Fly   463 PEPYQGQLRFYLIGVVSYGIGCARPNVPGVYSSTQYFMDWIIQQVQD 509
                ..|..|.|.||.|:|:|||....||||:....|:|||.:.:::
Zfish   775 ----YAQNTFVLQGVTSWGLGCANAMKPGVYTRVSKFVDWIERSIKE 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1299NP_647862.1 CLIP 37..93 CDD:197829 20/90 (22%)
CLIP 164..216 CDD:288855 14/63 (22%)
Tryp_SPc 260..503 CDD:214473 92/253 (36%)
Tryp_SPc 261..503 CDD:238113 92/252 (37%)
plgNP_958880.2 PAN_AP_HGF 31..104 CDD:238532
KR 109..190 CDD:214527
KR 190..270 CDD:214527
KR 281..361 CDD:214527 14/48 (29%)
Kringle 376..453 CDD:306546 11/80 (14%)
KR 490..572 CDD:214527 21/94 (22%)
Tryp_SPc 589..813 CDD:238113 94/254 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 154 1.000 Domainoid score I4208
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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