DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1299 and Ser7

DIOPT Version :9

Sequence 1:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_572582.1 Gene:Ser7 / 31917 FlyBaseID:FBgn0019929 Length:397 Species:Drosophila melanogaster


Alignment Length:382 Identity:113/382 - (29%)
Similarity:168/382 - (43%) Gaps:64/382 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 CRGPDTKPGNCVEIKEC----ASLLNELRSRSQDATFANFLRASNAVCQNKGTQVCCP------- 217
            |...:...|.|:|.|:|    ...|.||.|:.|            ...:.:...||||       
  Fly    29 CNSVEFGRGTCIEKKDCDFYAVDKLMELASKQQ------------CFSRQRPDLVCCPRETNIIP 81

  Fly   218 -----TGQGITNTTPAPS--QIVPKNTDEIPRRLLNVEEG--CGSTVGYFKKIVGGEVSRKGAWP 273
                 ...|.||.|.:.:  :::|:.|...|..:..:.|.  |||...:  ::|||..:....:|
  Fly    82 PLAPRISNGTTNATSSTTTLKLLPRTTPRPPSGIDQLPEHPYCGSAFSF--RLVGGHNTGLFEFP 144

  Fly   274 WIALLGYDDPS-GSPFKCGGTLITARHVLTAAHCIR---QDLQFVRLGEHDLSTDTE-------- 326
            |..||.|:..| |..:.||.:.|..|.:|||||||.   ::|....|||.:..||.:        
  Fly   145 WTTLLEYETVSGGKDYACGASFIAQRWLLTAAHCIHTMGRNLTAAILGEWNRDTDPDCENDLNGV 209

  Fly   327 ----TGHVDINIARYVSHPDYNRRNGRSDMAILYLERNVEF--TSKIAPICLPHTANLRQKSYVG 385
                ..|:.:.|.|.:.|..|:..|.|:|:|:|.|.|.|.:  ...:.|:|||...........|
  Fly   210 RECAPPHIRVTIDRILPHAQYSELNYRNDIALLRLSRPVNWLQMQNLEPVCLPPQRGRYANQLAG 274

  Fly   386 YMPFVAGWGKTMEGGESAQVLNELQIPIYDNKVCVQSYAKEKRYFSADQFDKAVLCAGVLSG--G 448
            ....|:|||||...| |:::..:..:.|.....|.:::.|:.:...||    :.:|||   |  |
  Fly   275 SAADVSGWGKTESSG-SSKIKQKAMLHIQPQDQCQEAFYKDTKITLAD----SQMCAG---GEIG 331

  Fly   449 KDTCQGDSGGPLML-PEPYQGQLRFYLIGVVSYG-IGCARPNVPGVYSSTQYFMDWI 503
            .|:|.|||||||.: .....|....||.||||.| ..|......|:|:....:||||
  Fly   332 VDSCSGDSGGPLTVEANTASGNRYVYLAGVVSIGRKHCGTALFSGIYTRVSSYMDWI 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1299NP_647862.1 CLIP 37..93 CDD:197829
CLIP 164..216 CDD:288855 12/55 (22%)
Tryp_SPc 260..503 CDD:214473 85/264 (32%)
Tryp_SPc 261..503 CDD:238113 85/263 (32%)
Ser7NP_572582.1 CLIP 29..74 CDD:197829 13/56 (23%)
Tryp_SPc 131..388 CDD:214473 85/264 (32%)
Tryp_SPc 133..391 CDD:238113 87/264 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D402896at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.